Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00586 ATGGAGCCCAACTTTCCCAGAGTTGACCTGTTTGATGAAGAGGGGAGCATACCGTACCTCTCAGACTCACTTGGTTTTGCCACTGTGGATCCTCCGCTGGAAGACAACGACTTCTCAGAAACTGTCAAGTTCATAAACCACATCCTCATGGAAGAGAACGTTCAACAAAATCCATTCTATGACTCACTCACCTTGCAGATTACCGAGAAGTCCTTCTATGATACTCTCATCGGTAATCTTTCCCCTAACCAACACGCCCTTGTTCTAAGCCCCGAAGGGGAAACCACCTCCACCACCAGCAATAACAACAACAGCAGTTTTTTAGATGGAAATTTCCCTTCCCTGGATTCTGTTTCTGTTTCTGCTTCTGCTTTTCAGTTTGATCCCCACACCCTTTCTAAACCACCCTCACTTAATGTCAGTCATGGATTCTCAGATTTGGATTCTTCTATTGCCAAACTCGTGGCACAGAACATGTTCAACGATGCTGATTCCGTTTCCCAGTTTAAGAGAGGGTTAGAGGAAGCTACTAAGTTTCTTCCTTCTTGCCCTAAGCTTGTAACTGGTCTGCAGTCAAACGGGGAAGAAGCAATCAATACGTTTGTAGATAAGTCCTTCGGGTGGAAGAGCAGGAAGAATCACGAGCGCCAAGAGAGAGAGACCATAGAAGAAGAAGGGAGAAGTAGTAAGCAGTCGGCACTTAGCCTTGTTGATGAGGGTGACATTTCAGAAGCAATCGATCGGGTGTTTCTAAGTGTGGAAAACGTGGATAGTGAACACAGTTCTTTGCAGAGTGAAGCAGTGAAAGGTGAGGAGCGAGATGGAGGGAAGGGCCGATCCAAGAAACAAGTGAAGAAAAAGGAAACTGTGGATTTGAGGAATCTTCTGTTGATGTGTGCACAATCTGTGTATGCCAATGACAACAGAGGTGCCACTGAATTACTAAAGCAGATTAGGCAACACTCTTCTCCCTTTGGGGATGCATCACAGAGGGTAGCTCATTATTTCGCCAATGGTCTCGAGGCACGCTTGGTTGGGACTGGTTCAGGCGCTCATGTACTATTTTCTTTTCTGAGTTCTAAGAGGATTACTGCTGCTGAGTTCCTGAAGGCATACCAAGTTTTTCTATCTTCCACCCCTTTCAAGAAGTTTACATATTTCTTTGCAAATAAAATGATTATGGAAGCAGCTGAAAAATCAGAAACCGTCCACATTATTGATTTTGGTATCCTATATGGTTTCCAGTGGCCAACTCTAATAAAGTTTTTATCAAATAGAAAGGGTGGTCCTCCCAAACTGAGGATCACAGGGATAGAGTTTCCCCAACCAGGCTTTCGTCCCACTGAAAAAATTGAGGAGACAGGTCACCGTCTTGCTAACTATTGTAAGCGTTATAAGGTTCCCTTTGAATACCATGCCATAGCATCAAAGAACTGGGAAACCATTCAGGTGGAAGCCCTTAAAATTGAGAGCAATGAGATAGTTGCTGTCAACTGTCACATGAGGTTTGAACATTTACTGGATGAGAGTACTGTTGAAGTGAACAGTCCTAGAAATGCAGTCCTACATTTGATCAGGAAGATAAATCCGGATATCTTTACTCAGATCATTATTAATGGTTCATATAGTGGCCCCTTCTTTACCACACGGTTTAGGGAGGCACTATTCCATTATTCTGCTGTTTATGATATGTTTGATATTGTCGTGCCTCGTGAAAACGATTGGAGGTTGATGATTGAGAGAGAGCTTTTGGGTCGAGAGGCTATTAATGTTATAGCATGTGAAGGTTCTGACAGGGTTCAGAGACCTGAGACATACAAACAATGGCAAGTTAGGAATACAAGGGCTGGTTTCAAGCAGCTGCCATTGAATGAGGAATTAATGGCCAAATTTAAGACTAAGTTAAAGGAATATCACAGAGATTTTGTTTTCGATGAAGATAACAAGTGGATGCTTCAAGGTTGGAAAGGCCGCATTTTGAATGCTTCCACTTGTTGGGTGCCGACAAAATGA 2013 0.4322 MEPNFPRVDLFDEEGSIPYLSDSLGFATVDPPLEDNDFSETVKFINHILMEENVQQNPFYDSLTLQITEKSFYDTLIGNLSPNQHALVLSPEGETTSTTSNNNNSSFLDGNFPSLDSVSVSASAFQFDPHTLSKPPSLNVSHGFSDLDSSIAKLVAQNMFNDADSVSQFKRGLEEATKFLPSCPKLVTGLQSNGEEAINTFVDKSFGWKSRKNHERQERETIEEEGRSSKQSALSLVDEGDISEAIDRVFLSVENVDSEHSSLQSEAVKGEERDGGKGRSKKQVKKKETVDLRNLLLMCAQSVYANDNRGATELLKQIRQHSSPFGDASQRVAHYFANGLEARLVGTGSGAHVLFSFLSSKRITAAEFLKAYQVFLSSTPFKKFTYFFANKMIMEAAEKSETVHIIDFGILYGFQWPTLIKFLSNRKGGPPKLRITGIEFPQPGFRPTEKIEETGHRLANYCKRYKVPFEYHAIASKNWETIQVEALKIESNEIVAVNCHMRFEHLLDESTVEVNSPRNAVLHLIRKINPDIFTQIIINGSYSGPFFTTRFREALFHYSAVYDMFDIVVPRENDWRLMIERELLGREAINVIACEGSDRVQRPETYKQWQVRNTRAGFKQLPLNEELMAKFKTKLKEYHRDFVFDEDNKWMLQGWKGRILNASTCWVPTK* 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00586 670 Pfam GRAS domain family 292 666 IPR005202 -
Lapu11g00586 670 MobiDBLite consensus disorder prediction 210 234 - -
Lapu11g00586 670 MobiDBLite consensus disorder prediction 261 286 - -
Lapu11g00586 670 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 239 657 IPR005202 -
Lapu11g00586 670 MobiDBLite consensus disorder prediction 210 227 - -
Lapu11g00586 670 ProSiteProfiles GRAS family profile. 283 667 IPR005202 -
Lapu11g00586 670 MobiDBLite consensus disorder prediction 264 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00586 Lapu-Chr11 9150701 9153669 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00586 41 669 GRAS Transcription Factor Family AT1G07530 45.441 0.0 550
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu11g00586 GRAS 6.8e-115 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00586 - - gmx:100795855 953.74