Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00585 ATGGAGCATCCAAACTTGTTTGGTGAAGACGAGGGCATGGCCCATCTCGCAGAGTCGCTAGCTTTTCCATCTGTGGATCCTTCTTCCAGAGACCCTTCGCTGGAAGACAACGACTTCTCTGAAACTGCCAAGTTCATCAGCCAGATCCTCATGGAAGAGAACGTCGAACACAGGCCATTCTACGACTCACTCACCTTGCAAGTTACCGAGAAATCCTTCTACGACGCTCTCGCCGGTAACCTACTTCCTTCCCCCGATCAACACCCCCTTGCTTTCAGTCCCGAAGCTGAAACCACCACCACCACCGCCAGCACCAGCAGCAACAACAGTAACAATAGCAACAACAATTTTTCAGATGAAAATTCTAGTGAGTTGAAGCTTCCTTCTCCAGATTCTGTTTCTGTTTTTAAGTTTAACTCCCGCGCCCTTTCTCAACCATCTCCTTCAATTACCGCCAATCATGGAGTCCAAGATTTGGATTTTTCTATTGCCAAACTCTTAGCACAGAATATTTTCAATGATGTTGACTCCGTTTCCCAGTTTAGGCGAGGCTTGGAGGAAGCTAGCAAGTTTCTTCCTCCGGGACCTAACCTTGTGACTGGTCTGGATTCAAATGGAGAACAAGCGTTCAATAAGTTTGGAGAGACTTCCTATGGGTTGAAGAGTGGGAAAAATCACAAGCGAGATGAGAGATACTCTATAGAAGAAGAAGAACAACAAGAAGAGGGGAGAAGTAACAAGCAGTCGGCACTTTCCCTTGTGGATGAGAGTGACTTGTCAGATGCTTTTGATCGGGTGTTGCTTAATGATGGAAACATGTGTAGCCAAATCAGCTCTTTGCCAAGTAGAGCAGTGAAGGGTGATGAACCAGATGGAGGGAAGAGTCGTTCCAGGAAACAAGCCAGGAACAAGGAAACAGTTGATTTGAGGAATCTTTTGTTGATGTGCTCACAATCCGTGTATGCCAACGACCACAGGACTGCCAATGAATTGCTGAAGCAGATTAGGCAACACTCTTCTCCCTTTGGGGATGCATCACAGAGGTTGGCTCATTACTTTGCCAATGGTCTTGAAGCACGCTTGGTTGGGGATGGTACAGTTACTCAAGGGATTTATTCTTTTCTGACCTCTAAGAGGAGCTCTGCTGCTGAGTTTCTCAAGGCATTCCAGGTTTTGCTTTCCGCCTCCCCTTTCAAGAAGTTTGCATATTTCTTTGCAAATAAAATGATTATGAAAGCATCTGCAAAGGCAGAAACCATCCATATTATTGATTTTGGCATCCTATATGGTTTCCACTGGCCAATTCTTATTAAGTTTTTGTCAAATAGAGAAGGTGGTCCTCCCAAACTGAGGATCACAGGGATAGAGTTTCCCCAACCTGGCTTTCGCCCCACAGAAAGAATTGAGGAGACTGGTCGCCGTCTGGCTAACTATTGTAAGCGTTACAATGTTCCCTTTGAGTACAATGCCATAGCATCGAGGAATTGGGAAACAATTCAGATTGAAGCCCTTAAAATTGAAAGCAAGGAGCTAGTTGCTGTCAATTGTCACATGAGGTTTGAGAATTTACTGGATGAGTCTATTGAAGAGAACAGTCCTAGAAATGCAGTCTTGCATTTGATCAGGAAGATAAATCCAGATATATTTACGCAGTCCATCACTAATGGATCATATAATGCCCCCTTCTTTGCCACAAGGTTTAGAGAGGCTTTGTTTCATTATTCTGCTATATATGATATGTGTGACACTGTCATACCTCGTGAAAATGAATGGAGGTTGATGATTGAGAGAGAGCTTTTGGGCCGGGAGGCTATGAATGTTATAGCATGCGAAGGTTCTGCCAGACTTGAGAGGCCCGAGACATACAAACAGTGGCAGGCAAGGAATACAAGGGCTGGTTTCAAGCAGCTCCCATTGAATAAGGAATTGATGGCCAAATTTAGGACCAAGTTGAAGGAATGGTACCACAGAGATTTTGTCTTTGATGAAGATAACAATTGGATGCTGCAAGGCTGGAAGGGCCGCATTTTGTCTGCTTCCACTTGTTGGGTGCCGGCATAA 2061 0.4474 MEHPNLFGEDEGMAHLAESLAFPSVDPSSRDPSLEDNDFSETAKFISQILMEENVEHRPFYDSLTLQVTEKSFYDALAGNLLPSPDQHPLAFSPEAETTTTTASTSSNNSNNSNNNFSDENSSELKLPSPDSVSVFKFNSRALSQPSPSITANHGVQDLDFSIAKLLAQNIFNDVDSVSQFRRGLEEASKFLPPGPNLVTGLDSNGEQAFNKFGETSYGLKSGKNHKRDERYSIEEEEQQEEGRSNKQSALSLVDESDLSDAFDRVLLNDGNMCSQISSLPSRAVKGDEPDGGKSRSRKQARNKETVDLRNLLLMCSQSVYANDHRTANELLKQIRQHSSPFGDASQRLAHYFANGLEARLVGDGTVTQGIYSFLTSKRSSAAEFLKAFQVLLSASPFKKFAYFFANKMIMKASAKAETIHIIDFGILYGFHWPILIKFLSNREGGPPKLRITGIEFPQPGFRPTERIEETGRRLANYCKRYNVPFEYNAIASRNWETIQIEALKIESKELVAVNCHMRFENLLDESIEENSPRNAVLHLIRKINPDIFTQSITNGSYNAPFFATRFREALFHYSAIYDMCDTVIPRENEWRLMIERELLGREAMNVIACEGSARLERPETYKQWQARNTRAGFKQLPLNKELMAKFRTKLKEWYHRDFVFDEDNNWMLQGWKGRILSASTCWVPA* 687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00585 686 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 240 676 IPR005202 -
Lapu11g00585 686 MobiDBLite consensus disorder prediction 221 244 - -
Lapu11g00585 686 MobiDBLite consensus disorder prediction 278 303 - -
Lapu11g00585 686 MobiDBLite consensus disorder prediction 93 128 - -
Lapu11g00585 686 MobiDBLite consensus disorder prediction 214 253 - -
Lapu11g00585 686 MobiDBLite consensus disorder prediction 287 303 - -
Lapu11g00585 686 Pfam GRAS domain family 309 683 IPR005202 -
Lapu11g00585 686 ProSiteProfiles GRAS family profile. 300 684 IPR005202 -
Lapu11g00585 686 MobiDBLite consensus disorder prediction 85 128 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00585 Lapu-Chr11 9144491 9148128 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00585 44 686 GRAS Transcription Factor Family AT1G07530 48.930 0.0 600
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu11g00585 GRAS 2.3e-113 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00585 - - gmx:100795855 1034.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00585 11 9144491 9148128 Lapu11g00585 11 9144491 9148128 ECH
Lapu11g00585 11 9144491 9148128 Lapu5g00364 5 3016423 3019410 PCT