Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00584 ATGGATCCACGTTTCAAGTCCAATTTCATTAACGGTTTTAGACCTAACCAAGTGCCCAACACGGTTGTGGTAGAGGATCAGTTCATTGTCCCTGTTAATGGGATGATGAGACCGTTTGAGTTTGGATTCAGGGATAACCCGTTAATTCTTCCACCTGATCCAAACGTTGCTCAGAACCATGTTTCCTTTGCCACCCGTGAAGACTCTCAATCGGATGAGATTGATTTTTCTGCCACTGTTCTACGCTACATAAACCAAATGCTTATGGAAGAGGATTTGGAGGCGAAACCGTGTATGTTCCATGATTCCTTGGCTCTCCAAGCTGCTGAGAAATCATTCTATGAGGTCATTGGTGAGACATACCCTTCTTCAATAAAAAACTATCACAACGTGGACAGCTCTGATGATAGTAGCTTCAGTGGTTATGGCAGCAGTGGTACAACCACTAGCACTGGTAACTCGATCGAGTCCCATTGGAATAACGATCTTACTGACTATAATCCTTCCATACTGCAAACCACTTTTCCCACTGACTTTGTTTTCCAGGCCAATTCTATCCAATCTTCTATGAACACCACAAGCAACTTGGGTGTTACCAATGGTGGATTCTTGGCAAGTTCCACTGCGGCTGGATTTCTGGATCCAACCTTTTTTAGCAAGAGTGAGTCTGTACTGCAATTTGAGAGGGGTGTGGAGGAAGCCAATAAGTTCCTGCCTAAAGGGAATCCTTTGGTTATTGACTTGGAGAACCCCTCTTTTAGGAAGGTTCCTCCTCTACAGGAGGAAATTAAGGCAGAGAGAGATGAAATTTCTGCTGAGTCAAGAGGAAGGAAGAATCACGAGCGGGAAGATGAAGAAGCAGATTTACAAGATAGGAGAAGCAACAAGCAGTCAGCTGTGTATGATGACAGTGAGATATCAGAATTGCTTGATAAGGTTCTGCTAGGCACTAGATGCACAAATGAGCCAGCTCCTTCGTGTATTTGTTATGCAGACCTTCCTAATGGAGCATCCTTGAGTGTACAGAAGAAATTAGATGAAACAAACAAGTCTGGTGGTGGGAAGAGCCGTGGTAAGAAACAAGGAAACAAAAAAGGAGTTGTGGATCTGAGGACATTGTTGATTCTATGTGCACAAGCTGTTTCTTCTGATGATCGTGTAACTGCTAACGAGTTACTGAAGCAGATACGGCAACATACTTCTCCGCTGGGTGATGGGACTCAGAGGCAGGCCCATTGCTTTGCAAATGCCCTTGAAGCACGCTTGGCTGGGACAGGCACTCAGATTTATACTGCTTTGTCACACAAGAGAACCTCTGCAGCAGACATGGTGAAAGCTTACCAAATGTATATTTCGGCCTGTCCATTCAAGAAGCTCTCAATCATTTTTGCAAACCATACAATTTTGCAGCTAGCCATGGAAGTTGAATCTCTTCATATTATAGACTTTGGCATCCGTTATGGCTTCCAGTGGCCAGCTCTAATTTATCGTCTATCAAAACGACTTGGTGGGCCTCCCAAGCTGCGGATTACCGGGATAGAACTCCCACAACCTGGTTTCAGGCCAGCAGAGAGAGTCCAGCAGACGGGGCTTCGCCTTAAAAGATATTGTGATCGCTTTAGAGTTCCATTTGAGTTCAATGCCATTGCACAGAAATGGGAAACCATCAAAATTGAGGACTTGAAGATCAAGGAAAACGAACTTCTTGCAGTGAATTCTATGTTTAGATTTCAAAATCTACTTGATGAGACAGTTGTGTTGAATAGTCCCCGGGATGCTGTTTTAGATTTAATAAGAAAGGCAAATCCCACTATCTTTATACATGGTACTGTCAATGGGAGCTATAATGCTCCATTCTTTGTGACACGGTTCCGGGAGGCCCTTTTCCATTATTCTACTTTGTTTGATGTGCTCGATACTAACGTCACTCGTGAAGATCCAATGAGGTTGATGTTTGAGAAAGAGTTTTTTGGGCGGCGCGTAATGAATGCTTTAGCTTGTGAGGGTTGTGAGAGGGTCGAGAGGCCCGAGACATACAAGCAGTGGCAGGTTAGGAACACGAGAGCTGGATTTAGGCAACTTCCCTTGGATAAACATCTCATCAACAAATTAAGATGCAAGTTGAAAGATATGTACCACAGTGATTTCATGCTTCTTGAAGATGCCAACTATATGCTGCAAGGTTGGAAGGGCAGAGTAGTTTATGCTTCCTCTTGTTGGGTGCCTGCATAG 2232 0.4395 MDPRFKSNFINGFRPNQVPNTVVVEDQFIVPVNGMMRPFEFGFRDNPLILPPDPNVAQNHVSFATREDSQSDEIDFSATVLRYINQMLMEEDLEAKPCMFHDSLALQAAEKSFYEVIGETYPSSIKNYHNVDSSDDSSFSGYGSSGTTTSTGNSIESHWNNDLTDYNPSILQTTFPTDFVFQANSIQSSMNTTSNLGVTNGGFLASSTAAGFLDPTFFSKSESVLQFERGVEEANKFLPKGNPLVIDLENPSFRKVPPLQEEIKAERDEISAESRGRKNHEREDEEADLQDRRSNKQSAVYDDSEISELLDKVLLGTRCTNEPAPSCICYADLPNGASLSVQKKLDETNKSGGGKSRGKKQGNKKGVVDLRTLLILCAQAVSSDDRVTANELLKQIRQHTSPLGDGTQRQAHCFANALEARLAGTGTQIYTALSHKRTSAADMVKAYQMYISACPFKKLSIIFANHTILQLAMEVESLHIIDFGIRYGFQWPALIYRLSKRLGGPPKLRITGIELPQPGFRPAERVQQTGLRLKRYCDRFRVPFEFNAIAQKWETIKIEDLKIKENELLAVNSMFRFQNLLDETVVLNSPRDAVLDLIRKANPTIFIHGTVNGSYNAPFFVTRFREALFHYSTLFDVLDTNVTREDPMRLMFEKEFFGRRVMNALACEGCERVERPETYKQWQVRNTRAGFRQLPLDKHLINKLRCKLKDMYHSDFMLLEDANYMLQGWKGRVVYASSCWVPA* 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00584 743 ProSiteProfiles GRAS family profile. 361 741 IPR005202 -
Lapu11g00584 743 MobiDBLite consensus disorder prediction 259 301 - -
Lapu11g00584 743 Pfam GRAS domain family 370 740 IPR005202 -
Lapu11g00584 743 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 285 734 IPR005202 -
Lapu11g00584 743 MobiDBLite consensus disorder prediction 257 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00584 Lapu-Chr11 9139021 9142486 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00584 80 743 GRAS Transcription Factor Family AT1G07530 55.079 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lapu11g00584 GRAS 8.9e-112 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00584 - - gmx:100815586 1228.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00364 5 3016423 3019410 Lapu11g00584 11 9139021 9142486 PCT
Lapu11g00584 11 9139021 9142486 Lapu5g00365 5 3033267 3035573 PCT