Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00577 ATGGGAGTTTGTTTGAGCATCAAAATTAAAACTGGGTTAAACTCAAAGCATGTGAGTGCCGATGCCAAAGATCTCAGCAGTCCAAGTAGTAAAATTACAAAAGATATAAGTAGCACAATTAGTAAGGTCTCAGAGGTTTCGGTGCCTCCGACTCTTCAGAGCGAGGGTGAGATCTTATTTTCATCTAATCTGAAGAGCTTTAGTTTGACAGAACTTACAGCTGCCACAAGAAATTTCCGTACGGACAGTGTGTTAGGAGAGGATGGTTTTGGATCAGTTTTTAAGGGCTGGATTGATGATCACTCACTTTCTGCAACCAAACCTGGCACGGGGATTGTTGTTGCTGTGAAAAGACTTAGCCAGGATAGCTTCCAAGGTCATGAGGAGGGGTTGGCAAGGCACGGTATGACTCATGAAGCAAGTCTCGAGGATGAAGTAAACTATCTAGGCCAGCTTTCTCATCCTCATCTAGTGAAATTAATTGGGTATTGCTTTGAAGATAGAGACCGTCTTCTGGTCTATGAATTTATGCCTCGTGGTAGCTTGGAGAATCACTTGTTCATGAGAGGCTCATATTTTCAACCTCTTTCTTGGGGCCTGCGTTTGAAAGTCGCTCTTGGTGCTGCCAAAGGACTTGCATTTCTTCACAGTGCTGAAACAAAAGTGATATATCGAGATTTCAAGACCTCAAATGTCTTGCTGGATTCAAATTATAACGCAAAGCTTGCCGATTTGGGGCTCTCAAAGGACGCACCTACACGTGACAAAAGTCGTGTCTCCACCAGAGTAATAATGGGAACCTACGGATATGCAGCTCCAGAATATCTAGCCACAGGTCATGTGAGTGCTAAGAGTGATGTCTTCAGTTTTGGAGTTGTGCTGCTAGAACTGTTATCTGGCAGGAGGGCTGTGGACAAGAACAGACCATCAAGACAGCCCAATTTGGTGGAATGGGCAAAGCCATACGTAGCAAATAAGAGAAAGCTTTTGCGTGTATTGGATAACCGTCTTGAAGGCCAATATGATATAGATGAGGCCTTTAAGGTAGCTACCCTCTCTCTGCGATGCCTTGCGACAGAATCCAAGTTGAGACCAAACATGCACGAAGTTGTCACAGAATTGGAGCAGCTTCAGGTTCCCCATGTACATCATAATCGTTCTGTGAATACCTCTCGTGGTCGTAGAAAAAGTGCTGATGATTTTAACCATGGTAGAAGCGCTACAGCTTCAGTTTCCCCTCTCTCACATGACATTGCAAATACACGTCCTTGA 1272 0.4418 MGVCLSIKIKTGLNSKHVSADAKDLSSPSSKITKDISSTISKVSEVSVPPTLQSEGEILFSSNLKSFSLTELTAATRNFRTDSVLGEDGFGSVFKGWIDDHSLSATKPGTGIVVAVKRLSQDSFQGHEEGLARHGMTHEASLEDEVNYLGQLSHPHLVKLIGYCFEDRDRLLVYEFMPRGSLENHLFMRGSYFQPLSWGLRLKVALGAAKGLAFLHSAETKVIYRDFKTSNVLLDSNYNAKLADLGLSKDAPTRDKSRVSTRVIMGTYGYAAPEYLATGHVSAKSDVFSFGVVLLELLSGRRAVDKNRPSRQPNLVEWAKPYVANKRKLLRVLDNRLEGQYDIDEAFKVATLSLRCLATESKLRPNMHEVVTELEQLQVPHVHHNRSVNTSRGRRKSADDFNHGRSATASVSPLSHDIANTRP* 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00577 423 SUPERFAMILY Protein kinase-like (PK-like) 63 380 IPR011009 -
Lapu11g00577 423 MobiDBLite consensus disorder prediction 403 423 - -
Lapu11g00577 423 ProSiteProfiles Protein kinase domain profile. 79 377 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00577 423 FunFam Serine/threonine-protein kinase BIK1 47 176 - -
Lapu11g00577 423 ProSitePatterns Serine/Threonine protein kinases active-site signature. 222 234 IPR008271 GO:0004672|GO:0006468
Lapu11g00577 423 Gene3D Transferase(Phosphotransferase) domain 1 177 399 - -
Lapu11g00577 423 PANTHER OS01G0588500 PROTEIN-RELATED 35 378 - -
Lapu11g00577 423 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 177 388 - -
Lapu11g00577 423 MobiDBLite consensus disorder prediction 381 423 - -
Lapu11g00577 423 Pfam Protein tyrosine and serine/threonine kinase 81 374 IPR001245 GO:0004672|GO:0006468
Lapu11g00577 423 Gene3D Phosphorylase Kinase; domain 1 51 176 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00577 Lapu-Chr11 9082178 9086486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00577 65 374 Glycoside Hydrolase AT3G07070 46.815 2.48e-88 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lapu11g00577 PK_Tyr_Ser-Thr 7.3e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00577 - - vun:114169806 712.605