Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00575 ATGGGAAACGGCATAGGGAAGTTAACGGTGTGCTTCACCGGAAATAACGGTGGGGGTCGTCGGAAGCAGGATATATCCATTTTAATAACGGAGCCTCTGGACGAGGGTTTGGGTCACTCGTTCTGCTACGTTAGACCCGACCCGACCCGGATATCGTCATCGAAGGTGCACTCAGAGGAGACAACGACGTTCAGAACAATCTCGGGCGCGTCGGTGAGCGCGAACACGTCGACGCCGTTGTCGACGGCGTTCGTGGACTTGTACTCCTACGGTTGCATAGACCGAGCGGCGGCGTTCGAGAGTTCAACGTCGTTTGCGTCGCTTCCTCTGCAACCGATTCCGCGGAACCTGGTGAACTCGGGGCCCTTCTCGGGGAACCTGGGCGGTGGTGGGTTTCCAGGCTCGGGCCCGCTCGAGAGGGGGTTCATGTCGGGGCCCATCGAGCGCGGGTTCATGTCAGGGCCCATCGATCGCGGGCTTTTTTCGGGGCCGATGGAGAGGGAGGGAAACGGATCGGATCATTTCCCGAGAAGCTTTTCGCACGGAGGGTTGGGTTTAGGGTTGGGATTAGGTTTGAGAGTGAGAACGAGGAAGGGTCGGTGGATTCGTGTTTTGCAGAGGGCGATTTCGAAGACTCTCTCTCGGGGGCAGAACTCGATTGTGGCTCCGATCAAAGGGGTGGTGGTGAAGGAGCCGGAGTGGATGGTGGCGGCGGCGGAGAAGCATAATGAGAATCTGAGTGTGAACTTGAGCAGTGAGGGGAGCTTGGAGGACGATGATTCCATGGAGAGTCAGAATCTTCAATGGGCTCAGGGGAAAGCAGGGGAAGATCGCGTGCATGTTGTTGTGTCTGAAGAACACGGTTGGGTTTTCGTGGGGATCTATGATGGTTTCAATGGACCCGATGCCCCTGATTACCTTCTCTCGAATCTCTACACCGCGGTGCACAAGGAGCTGAAAGGGTTGTTGTGGGATGATGGGTCTGCACCGGAAAATTCGACGCCTAAAGAGGACGTGTTGCGAGATGTCACAGACGTTGCAGATGTAGATACCTGTTCTCACTGTGTTGAACAAGAAAATAATAACTATAACAGGAGTACTAATAAGAAAGGTAGGAATTCGAGGAACAAGTTCAAAGGTGCTGCGAATAAGTGGGAGGAGAATCAACGAAGATGGAAGTGTGAGTGGGATAGGGAGAGAATAGAGCTTGATCGAAGATTGAAGGAGCAGCTGAATTTAAGCCGATCTGGGTCAGGTGGAACAGCAAGTTCTATTAACCATGCGGATGTTTTGGAAGCTCTTTCTCGGGCACTGAGGAAGACTGAGGAGTCTTACCTTGATGTTGCGGATAAGATGGTGATGGAGAATCCCGAACTTGCCTTGATGGGTTCTTGTGTTCTTGTGATGTTGATGAAGGGGGAGGATGTTTATGTAATGAATGTGGGGGATAGTCGCGCTGTGCTGGCTCAGAAGGCTGAGCCTGATTATTGGTTGGGCAAGATCAGGCAGGACTTGGAGAGGATCAATGAGGAGACAATGAATGATCTTGAATCCTGGGATGTTGATAACTCCAGCTTGCTTCCAAGTCTTAGTGCGATTCAGCTTACTAAGGATCATAGTACTAGTGTTGAAGAAGAAATTCAGAGAATTAAAAAGGAGCACCCGGATGATCCTTGTGCTGTTGTAAATGACCGTGTTAAGGGTTCTCTCAAGGTTACCCGAGCATTTGGTGCCGGATTTCTCAAACAGCCCAAGTGGAACAACGCGCTTCTGGAGATGTTTAGAATAGACTACGTAGGAAACTCTCCTTACATCAGCTGCCTACCGTATCTAAAGCACCACAGATTAGGTCCAAAGGACAAATTTTTGATTCTATGCTCCGATGGGCTCTATCAGTACTTGTCAAACGAAGAGGCAGTGGCTGAAGTTGAGCATTTCATCACATTGCAACCTGAGGGAGACCCGGCTCAGCATTTGGTTGAAGAAGTCTTATTTCGTGCTGCAAAGAAAGCTGGTTTGGTCTTTCACGAGTTGCTGGAAATTCCACAGGGTGATAGGCGCCGTTACCATGATGATGTTTCCATCATTGTTATTTCTTTGGAGGGAAGGATATGGAGATCATGTGTATAA 2130 0.5042 MGNGIGKLTVCFTGNNGGGRRKQDISILITEPLDEGLGHSFCYVRPDPTRISSSKVHSEETTTFRTISGASVSANTSTPLSTAFVDLYSYGCIDRAAAFESSTSFASLPLQPIPRNLVNSGPFSGNLGGGGFPGSGPLERGFMSGPIERGFMSGPIDRGLFSGPMEREGNGSDHFPRSFSHGGLGLGLGLGLRVRTRKGRWIRVLQRAISKTLSRGQNSIVAPIKGVVVKEPEWMVAAAEKHNENLSVNLSSEGSLEDDDSMESQNLQWAQGKAGEDRVHVVVSEEHGWVFVGIYDGFNGPDAPDYLLSNLYTAVHKELKGLLWDDGSAPENSTPKEDVLRDVTDVADVDTCSHCVEQENNNYNRSTNKKGRNSRNKFKGAANKWEENQRRWKCEWDRERIELDRRLKEQLNLSRSGSGGTASSINHADVLEALSRALRKTEESYLDVADKMVMENPELALMGSCVLVMLMKGEDVYVMNVGDSRAVLAQKAEPDYWLGKIRQDLERINEETMNDLESWDVDNSSLLPSLSAIQLTKDHSTSVEEEIQRIKKEHPDDPCAVVNDRVKGSLKVTRAFGAGFLKQPKWNNALLEMFRIDYVGNSPYISCLPYLKHHRLGPKDKFLILCSDGLYQYLSNEEAVAEVEHFITLQPEGDPAQHLVEEVLFRAAKKAGLVFHELLEIPQGDRRRYHDDVSIIVISLEGRIWRSCV* 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00575 709 ProSiteProfiles PPM-type phosphatase domain profile. 259 700 IPR001932 -
Lapu11g00575 709 PANTHER PROTEIN PHOSPHATASE 2C 255 698 IPR015655 GO:0004722|GO:0006470
Lapu11g00575 709 SUPERFAMILY PP2C-like 273 701 IPR036457 -
Lapu11g00575 709 Pfam Protein phosphatase 2C 421 656 IPR001932 -
Lapu11g00575 709 Gene3D - 237 705 IPR036457 -
Lapu11g00575 709 SMART PP2C_4 260 698 IPR001932 -
Lapu11g00575 709 CDD PP2Cc 423 700 IPR001932 -
Lapu11g00575 709 FunFam probable protein phosphatase 2C 4 237 705 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00575 Lapu-Chr11 9063677 9066501 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00575 1 709 PP2C-type Phosphatase Gene Family AT1G07630 67.684 0.0 928
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00575 - - pvu:PHAVU_011G064200g 1326.61
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00575 11 9063677 9066501 Lapu11g00575 11 9063677 9066501 ECH