Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00566 ATGGCGAAGACGCTCATTTCGTCTCCTTCGTTCCTCGGAACGCAGCTTCCCTCGCTCCCTCGCCACCACCGCACCACCACCAGGCTTGTCGCAACCAAGGTCCATGTCAGCCTCCACCAAATCCCCGATATCCACTCCATAAGCCACTCCATTGACTTCGCTGGTATCGCCACCCGAGCCGAAAGCCTTCTTTACACGCTCGCCGATGCTGCGGTTGCGGCGGACCCCGCCGCTTCCACCACTGATGCTGCCGTGCAGAAGAACGGAGGCTGGTTCGGCTTCATCTCCGAAGCCATGGAGTTCGTTCTCAAGGTGTTGAAGGATGGTCTTTCTGCTGTGCATGTGCCTTATGCATATGGATTTGCTATCATATTACTCACTGTTATAGTTAAGGCTGCGACACTTCCCTTGACAAAGCAACAGGTTGAATCTACGTTGGCTATGCAAAATCTTCAACCAAAAATCAAGGCCATTCAAGAAAGATATGCTGGCAATCAGGAAAGAATACAACTTGAGACATCAAGGCTATATCGGCAGGCTGGGGTTAACCCATTGGCAGGTTGTTTACCTACTTTGGCTACCATTCCGGTGTGGATTGGTCTCTACCAAGCATTATCAAATGTGGCAAATGAGGGACTGTTAACTGAAGGTTTCTTTTGGATACCCTCTTTGGCTGGTCCTACTACCATTGCTGCTAGACAAAGTGGAGCTGGAATTTCTTGGCTTTTTCCATTTGTGGATGGGCATCCACCTTTGGGTTGGCAAGATTCTGCAGCATATCTTATTTTACCCATTCTTCTTGTTGTTTCTCAATTTGTTTCAATGGAAATCATGAAACCACCTGAGACAGATCCTTCTCAAAAGAATCAACTTCTTGTTTTAAAGTTTCTTCCACTCATGATCGGCTACTTCTCACTGTCTGTCCCATCAGGATTAACAATTTACTGGTTTGTAAACAATGTCCTGAGCACAGCTCAACAAGTATGGTTGCGCAAATTGGGAGGTGCAAAGCCTGTTGTGAGTGAAAATGCCAGTGGGATTATTACTGCAGGACGTGCTAAAAGATCAGATTCCCAGCCAGCAAAAGGCGGTGAAAGGTTTAAGCAGTTAAAAGAAGAGGAAAAGAAGAAAAAGTTTAGCAAGGCACTGCCAGTGGAAGATGTTCAGCCACTTGCTTCTGTTTCCGCTTCTGATGATGGCTCGGATATAGAAAGTGACAACAAGGAAGTTGCAGAAGAAGCCTATGCTTCTAAAGTTGGTGAAGAGGTTCAAATTAATTCTAGGGAAAGAAGAAGCAAGCGTTCGAAGCGGAAGCGTGCTGTATAA 1326 0.4653 MAKTLISSPSFLGTQLPSLPRHHRTTTRLVATKVHVSLHQIPDIHSISHSIDFAGIATRAESLLYTLADAAVAADPAASTTDAAVQKNGGWFGFISEAMEFVLKVLKDGLSAVHVPYAYGFAIILLTVIVKAATLPLTKQQVESTLAMQNLQPKIKAIQERYAGNQERIQLETSRLYRQAGVNPLAGCLPTLATIPVWIGLYQALSNVANEGLLTEGFFWIPSLAGPTTIAARQSGAGISWLFPFVDGHPPLGWQDSAAYLILPILLVVSQFVSMEIMKPPETDPSQKNQLLVLKFLPLMIGYFSLSVPSGLTIYWFVNNVLSTAQQVWLRKLGGAKPVVSENASGIITAGRAKRSDSQPAKGGERFKQLKEEEKKKKFSKALPVEDVQPLASVSASDDGSDIESDNKEVAEEAYASKVGEEVQINSRERRSKRSKRKRAV* 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00566 441 CDD 5TM_YidC_Alb3 120 332 IPR047196 -
Lapu11g00566 441 MobiDBLite consensus disorder prediction 401 416 - -
Lapu11g00566 441 PANTHER OXA1 67 377 IPR001708 GO:0016020|GO:0032977
Lapu11g00566 441 NCBIfam membrane protein insertase YidC 119 331 IPR028055 -
Lapu11g00566 441 MobiDBLite consensus disorder prediction 390 441 - -
Lapu11g00566 441 Pfam 60Kd inner membrane protein 119 332 IPR028055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00566 Lapu-Chr11 8961912 8967634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00566 21 388 Chloroplast and Mitochondria Gene Families AT2G28800 68.649 0.0 511
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00566 K03217 - gmx:100817173 729.169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00566 11 8961912 8967634 Lapu11g00566 11 8961912 8967634 ECH