Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00538 ATGGTTTCTGAATCCCTCTTGTTAGTTCTGAGTTTCTTCCTCTGTGCTTACCTCTTTAAACTCTTGTTCGAGGAAAGAAGAAAGCCCAAGGCCCACTTTAAGCTCCCTCCAAGCCCACCAGCTATACCCGTAATCGGTCACCTCCATCTGCTTAAACCCCTCATCCATCACGCGTTCCACGAACTTTCTCTCCGATATGGGCCTCTTCTATACCTTCGAATAGGTTCTGTGAAGTTCATAGTTGCAAGCACCTCTTCACTCGCCAAAGAATTTCTCAAGACCAATGAACTCACGTACTCTTCTCGCAAAATGAACATGGCCATTAACATGGTTACCTACCACGACGCTACGTTCGCGTTTGCCCCTTACGACACTTACTGGAAGTTCATCAAAAAGCTCAGCACCACTGAGCTCTTGGGAAACAAAAGACTTGAGCAGTTCCTACCTATTCGGACAAGGCTAGTTCACGAATTCGTTCAAACTCTGCTCCACAAATCTCAGGCCAAAGAAAGCGTGAACCTCACTGACTCACTCTTGAGGCTTTCCAATAACGTGATCTCGCAGATGATGCTGAGCATCAAGAGCTCCGGAACAGACAGCCAGGCAGAACAGGCACGTGGGTTAGTTCGTGAAGTGACGCAGATTTTCGGGGAGTTGAACATTTCGGACTTCGTAGGTTTCTTCAAGAACTTGGACTTGCAAGGTTTCAAGAAGAGGTCATTGGATATACACAAGAGGTACGATTCTCTGCTAGGGAAGATCATCTCTGATCGTGAAGAACTAAGAAGGGAATCGAAGGTTAAGGGTTGTGAAGACGAAGAGAAAGTGAAGGATTTTCTTGATATTTTGCTGGATATTGTCGAGCAGAAAGAATTGGAGGTTGAGCTAACTCGGAACCATGTCAAATCATTGATCTTGGATTATTTTACAGCAGCTACTGATACAACTGCTATATCAGTGGAATGGGCAATAGCAGAACTGTTCAACAATCCAAGTGTGCTGAAGAAAGCTCAAGAGGAGGTGGACAGAGTCACTGGAAACAAGAGAATAGTGTGTGAAGCAGACAGTTCAAACCTTCCTTATATACATGCCATCATAAAAGAAACAATGAGGCTTCACCCGCCACTACCAATGATTATGAGGAAGGGGATCAAAGACTGTGTGGTTAATGGAAACATGATTCCAAAGGGTTCAATAGTTTGCATAAACATTTGGGGTATGGGGAGGGATCCAAGTATCTGGGACAACCCTTTAGAGTTTAGGCCAGAAAGGTTTAAAGAAGGTGAAGGAAGAGATGTAGATTTAAAAGGGCAGCATTTTGAGTTGTTGCCATTTGGGAGTGGAAGAAGAGGGTGTCCTGGGATGCCTTTGGCCATGCGTGAACTACCTACAATCATTGGAACACTCATACAGTGTTTTGAGTGGAAGATGTTTGGTTCTGAAGGTGAAATCTTAGAGCATGGTAGGAGTAAAATCTGTATGGATGAACGACCAGGGTTGACAGCTCCAAGGGCCAATGATCTTATATGCATTCCTGTTGCACGATTCAATCCTACACTTTTTCATCAACTCTAG 1575 0.4432 MVSESLLLVLSFFLCAYLFKLLFEERRKPKAHFKLPPSPPAIPVIGHLHLLKPLIHHAFHELSLRYGPLLYLRIGSVKFIVASTSSLAKEFLKTNELTYSSRKMNMAINMVTYHDATFAFAPYDTYWKFIKKLSTTELLGNKRLEQFLPIRTRLVHEFVQTLLHKSQAKESVNLTDSLLRLSNNVISQMMLSIKSSGTDSQAEQARGLVREVTQIFGELNISDFVGFFKNLDLQGFKKRSLDIHKRYDSLLGKIISDREELRRESKVKGCEDEEKVKDFLDILLDIVEQKELEVELTRNHVKSLILDYFTAATDTTAISVEWAIAELFNNPSVLKKAQEEVDRVTGNKRIVCEADSSNLPYIHAIIKETMRLHPPLPMIMRKGIKDCVVNGNMIPKGSIVCINIWGMGRDPSIWDNPLEFRPERFKEGEGRDVDLKGQHFELLPFGSGRRGCPGMPLAMRELPTIIGTLIQCFEWKMFGSEGEILEHGRSKICMDERPGLTAPRANDLICIPVARFNPTLFHQL* 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00538 524 FunFam Cytochrome P450 family protein 27 510 - -
Lapu11g00538 524 PRINTS E-class P450 group I signature 363 381 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 PRINTS E-class P450 group I signature 452 475 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 PRINTS E-class P450 group I signature 300 317 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 PRINTS E-class P450 group I signature 181 199 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 PRINTS E-class P450 group I signature 403 427 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 PRINTS E-class P450 group I signature 442 452 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 PRINTS E-class P450 group I signature 320 346 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 CDD CYP93 67 512 - -
Lapu11g00538 524 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 445 454 IPR017972 GO:0005506|GO:0016705
Lapu11g00538 524 PRINTS P450 superfamily signature 311 328 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 PRINTS P450 superfamily signature 443 452 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 PRINTS P450 superfamily signature 364 375 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 PRINTS P450 superfamily signature 452 463 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 PANTHER CYTOCHROME P450 98A9 9 518 - -
Lapu11g00538 524 Gene3D Cytochrome P450 25 506 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 SUPERFAMILY Cytochrome P450 36 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lapu11g00538 524 Pfam Cytochrome P450 36 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00538 Lapu-Chr11 8777522 8781335 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00538 35 515 Cytochrome P450 AT5G06900 41.201 1.42e-141 416
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00538 K23179 - gmx:100783503 874.774