Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00523 ATGTACACACATCGCAACGCCTCCCTCTCGCGCGCCGCCGAATCCCTCGCCCATTTTCTCTCTCCGCAGGACCCATCCACGGCGTCGCCAATGCAGTACGCCACCGCTCCTCAGCCGCACCACCACCAAGTGGCCCTGGGTGAGTTCGATTCGGAGGCCAGCTCGAATAACACGTACAACAGCTGCAGCAGCGGCTGCACCAGCTACATGGGGTCGCCGAGTTCGTTGGCGAGTTACGAGAGTCGCCGAGTTCAGAGAAGCGTTAGCAGCCACTCGCTGCAGAAGAACAGTGGTGGGCCCCACCACCCCTTTTCTCCTCTCTTCGCTCAGTTGCTTGACTCCCAAAACGGCCCCGTACGGAGAGCTTGCAGTACCGGTGACCTTCAGAGATTTCATGGAATGCAATATTATCATCATTCAGATAGTCCATTGTCGAGTGAAAGTAGCTTGATAATTGAAGAAATGAGCAGAACCAGTCCTTATAGCCCAGAGGAGAAGAAGGTCAGGATTGAGAGATATAGAAGCAAGAGAAACCAGAGGAACTTTGGCAAGAAAATTAAGTATGCTTGCAGGAAGACATTGGCAGATAGCAGGCCACGGATCAGAGGGCGATTTGCCAAGAATGACGAAATTGCAATGAACCCTCCAGTTCAGTGGAGCCACATGGGTACTGGAGAGGAAGAGGATGAGGAAGAAGAGAATTGGACCAATTTCTTTGATTCCTTAGTTCCTGCAAATCTTGCTCAGGAGCCTCATGGCAGTAGTTCCTCCTTTGGTGTGTTCTATTAA 789 0.5184 MYTHRNASLSRAAESLAHFLSPQDPSTASPMQYATAPQPHHHQVALGEFDSEASSNNTYNSCSSGCTSYMGSPSSLASYESRRVQRSVSSHSLQKNSGGPHHPFSPLFAQLLDSQNGPVRRACSTGDLQRFHGMQYYHHSDSPLSSESSLIIEEMSRTSPYSPEEKKVRIERYRSKRNQRNFGKKIKYACRKTLADSRPRIRGRFAKNDEIAMNPPVQWSHMGTGEEEDEEEENWTNFFDSLVPANLAQEPHGSSSSFGVFY* 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00523 262 MobiDBLite consensus disorder prediction 21 36 - -
Lapu11g00523 262 MobiDBLite consensus disorder prediction 21 40 - -
Lapu11g00523 262 Pfam CCT motif 168 208 IPR010402 GO:0005515
Lapu11g00523 262 MobiDBLite consensus disorder prediction 77 107 - -
Lapu11g00523 262 ProSiteProfiles CCT domain profile. 166 208 IPR010402 GO:0005515
Lapu11g00523 262 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 31 232 IPR045281 GO:0009909
Lapu11g00523 262 MobiDBLite consensus disorder prediction 77 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00523 Lapu-Chr11 8629582 8631945 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00523 162 211 C2C2-CO-like Transcription Factor Family AT5G15850 50.000 4.36e-11 60.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lapu11g00523 CCT 3.3e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00523 - - gmx:102667610 413.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00425 5 3524237 3526359 Lapu11g00523 11 8629582 8631945 PCT