Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00518 ATGGAGCCATTTCCGAGAGACCAACGTGGCTCGCTCGAAGTGTTCAACCCTTCGTCTTCTTATTCCACCGATAAGCCGGTGAACTCGCCCTTGCGCACTCAATCCACGTGGAAGACGTGGATTGACACGCGCGCCGACGAGCCACCGGAGCAGCAGCAACGCGGCGGTTCCGATGAAGTCACCGCCACGTCTTGGATGGCGCTCAAAGACTCCACTCCACCGCCGCCATCGCAGACACTGGCCGCGGTGCTCGGCGAGCCTCCGGCCGTGGCGGAGGTCGGGACCGCCGCGAAGCGCGCCGCGGAGTGGGGTCTGGTGCTGAAGACAGACACGGAGACCGGGAAGCCGCAGGGAGTGGCGGTTCGAACCTCCGGCGGGGAGGATCCGAGTGCGAAGGTGACCGGTGGGTCGAGGAGGGACTCCGGAAACTCCGTTCGGAGCTCCGGCGAATCCTCCGACGACGGGAGAGAGTACCGGGGAGGAATCCCGAGGGTTTCGGAGGACCTGAGGGACGCTTTGTCGGCTTTTCAACAGACTTTCGTGGTTTCGGATGCTACCAAACCCGATTACCCGATAATGTATGCCAGTGCCGGGTTTTTCAAGATGACGGGTTATACGTCGAAGGAGGTCATAGGGAGAAACTGCCGGTTTTTGCAGGGAGCAGACACGGATCCGGATGATGTGGCAAAGATAAGGGAAGCTTTACAAACAGGGCAGACCTACTGTGGAAGGTTACTGAATTACAAGAAGGACGGCACTCCCTTTTGGAACCTTCTCACTATTGCCCCTATCAAGGACCACGATTCCAGAGTCCTTAAATTTATAGGAATGCAAGTGGAGGTTAGCAAGCATACAGAGGGGACCAAGGAGAAGATGCTACGTCCCAATGGATTACCCGAATCCTTGATTCGTTACGATGCTCGTCAGAAAGAGAAGGCAAATAGTACAGTATCTGAGTTGTTGCTGGCTGTGAGGAGGCCACGGGCACTGAGTGAATCAGCAGGCCGTCCCTTGATCAGAAAGTCAGCATCTGGTGATGATGCTCAAGATAAACCAGAAAAGTCATCCAGGAGAAAATCTGAGAGTGTGGCTTCTTTCAGACGCAAATCACATGCAGGAGACAGAAGTTCAATGGAGAGAATCACTGAGCTACCTGAAAAGAAACACAAGACATCTCGTCGCCGTTCCTTCATGGGGTTCATCAGGAAAAGTCAGTCCAACTTCGAAAGCTTCAATGATGAAGCTGTGATTGAGGACAGCTCTGAGAGTATTGATGAGAATGATAAGAGGTCTGGTAGTTTTGATGGCAAAGTACAGAGGAGGGAAAAGAGAAAGGGTCTTGATCTTGCTACCACACTTGAACGTATTGAGAAGAACTTTGTCATTACTGATCCCAGACTGCCTGATAACCCCATTATCTTTGCATCTGATAGCTTCTTGGAGCTTACGGAGTATAGTCGTGAAGAAATCTTGGGAAGAAATTGCAGGTTTCTGCAAGGGCCTGAAACTGATCCAGCAACAGTGAGAAAAATCAGAGAGGCTATTGACAGTCAAACTGACGTCACTGTGCAACTCATTAATTATACAAAGACTGGTAAAAAGTTCTGGAACTTGTTTCATTTGCAACCTATGCGAGATCAGAAGGGAGAGGTACAGTACTTTATTGGAGTTCAACTTGATGGTAGTCAACACGTGGAGCCTCTTCATAACCGCATTGCAGAAAATACTGCAAAAGAGGGAGAACAATTGGTAAAAGAAACTGCTGAAAATGTCGATGATGCACTGAGGGAACTTCCAGATGCTAATATGAAACCAGAAGATTTATGGATGAATCATTCAAAAGTGGTTCACCCCAAACCACATAGAAGGGATGAAGCTGCTTGGAAAGCTATTCAGAAGATCATAGAAAGTGGAGAGCAGATAGGCTTGAATCATTTTAGGCCAGTTAAACCTTTGGGATCAGGAGATACTGGCAGTGTCTATCTGGTGGAGCTAGGTGAAACTGGCCAATATTTTGCCATGAAGGCTATGGAGAAGGGCATTATGCTCAATCGTAACAAGGTGCATAGAGCTTGCACAGAGAGAGAGATCCTGGACATGTTAGACCATCCTTTTCTTCCTGCATTATATGCTTCCTTTCAGACCAAAACACATGTTTGTTTGATAACCGATTATTGTTCTGGTGGAGAACTATTCCTTCTTCTTGATCGACAGCCAGCTAAGGTTCTCAGGGAAGATTCAGTGAGATTTTATGCTGCTGAAGTAGTTGTTGCGTTGGAGTATCTTCATTGTCAAGGGATAATATATCGGGATTTGAAGCCAGAAAATGTGTTGCTACAAAGCAGTGGACATGTGTCCCTAACAGATTTTGATTTGTCATGTTTGACATCTTGCAAACCACAGCTTCTAGTTCCATCTATAAATGAAAAGAAGAAAGCACACAAAGGCCAACAACCTCCAATATTTATGGCAGAACCTATGAGAGCATCAAACTCTTTTGTGGGCACAGAAGAGTACATAGCTCCGGAAATTATAACGGGTTCAGGCCATACAAGTGCTGTGGATTGGTGGGCTCTTGGAATTCTTCTATTTGAGATGTTTTATGGATATACACCATTCAGGGGAAAGACCAGACAAAGAACATTTACAAATATTCTGCACAAGGACCTTAAATTTCCCAAAAGTAAACAGGTAAGTTTCAGTGCAAAGCAGTTAATGTACCGGTTGTTGAACAGAGACCCCAAAAGCAGATTGGGTTCAAGAGAAGGAGCAAACGAAATTAAGAACCATCCATTCTTTCGGGGTGTCAATTGGGCCCTAGTTCGTTGCACGAAACCTCCTGAGCTTGATGCTCCTCTCTTCGAGACAACTGAAGGAGAAAAGGAAGCAAATTTTGAAGATCAAGTGCAAGAGGAGATGAACGTCTTCTGA 2931 0.4722 MEPFPRDQRGSLEVFNPSSSYSTDKPVNSPLRTQSTWKTWIDTRADEPPEQQQRGGSDEVTATSWMALKDSTPPPPSQTLAAVLGEPPAVAEVGTAAKRAAEWGLVLKTDTETGKPQGVAVRTSGGEDPSAKVTGGSRRDSGNSVRSSGESSDDGREYRGGIPRVSEDLRDALSAFQQTFVVSDATKPDYPIMYASAGFFKMTGYTSKEVIGRNCRFLQGADTDPDDVAKIREALQTGQTYCGRLLNYKKDGTPFWNLLTIAPIKDHDSRVLKFIGMQVEVSKHTEGTKEKMLRPNGLPESLIRYDARQKEKANSTVSELLLAVRRPRALSESAGRPLIRKSASGDDAQDKPEKSSRRKSESVASFRRKSHAGDRSSMERITELPEKKHKTSRRRSFMGFIRKSQSNFESFNDEAVIEDSSESIDENDKRSGSFDGKVQRREKRKGLDLATTLERIEKNFVITDPRLPDNPIIFASDSFLELTEYSREEILGRNCRFLQGPETDPATVRKIREAIDSQTDVTVQLINYTKTGKKFWNLFHLQPMRDQKGEVQYFIGVQLDGSQHVEPLHNRIAENTAKEGEQLVKETAENVDDALRELPDANMKPEDLWMNHSKVVHPKPHRRDEAAWKAIQKIIESGEQIGLNHFRPVKPLGSGDTGSVYLVELGETGQYFAMKAMEKGIMLNRNKVHRACTEREILDMLDHPFLPALYASFQTKTHVCLITDYCSGGELFLLLDRQPAKVLREDSVRFYAAEVVVALEYLHCQGIIYRDLKPENVLLQSSGHVSLTDFDLSCLTSCKPQLLVPSINEKKKAHKGQQPPIFMAEPMRASNSFVGTEEYIAPEIITGSGHTSAVDWWALGILLFEMFYGYTPFRGKTRQRTFTNILHKDLKFPKSKQVSFSAKQLMYRLLNRDPKSRLGSREGANEIKNHPFFRGVNWALVRCTKPPELDAPLFETTEGEKEANFEDQVQEEMNVF* 977
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00518 976 Gene3D Transferase(Phosphotransferase) domain 1 730 945 - -
Lapu11g00518 976 ProSitePatterns Serine/Threonine protein kinases active-site signature. 767 779 IPR008271 GO:0004672|GO:0006468
Lapu11g00518 976 CDD PAS 192 281 IPR000014 -
Lapu11g00518 976 SMART serkin_6 646 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00518 976 Coils Coil 577 597 - -
Lapu11g00518 976 FunFam Putative LOV domain-containing protein 179 335 - -
Lapu11g00518 976 MobiDBLite consensus disorder prediction 343 390 - -
Lapu11g00518 976 SUPERFAMILY PYP-like sensor domain (PAS domain) 186 278 IPR035965 -
Lapu11g00518 976 ProSitePatterns Protein kinases ATP-binding region signature. 652 675 IPR017441 GO:0005524
Lapu11g00518 976 MobiDBLite consensus disorder prediction 12 41 - -
Lapu11g00518 976 SMART pac_2 242 284 IPR001610 -
Lapu11g00518 976 SMART pac_2 522 564 IPR001610 -
Lapu11g00518 976 MobiDBLite consensus disorder prediction 108 162 - -
Lapu11g00518 976 CDD PAS 460 560 IPR000014 -
Lapu11g00518 976 FunFam Putative LOV domain-containing protein 730 945 - -
Lapu11g00518 976 Gene3D Phosphorylase Kinase; domain 1 645 729 - -
Lapu11g00518 976 PANTHER FLIPPASE KINASE 1-RELATED 463 956 - -
Lapu11g00518 976 MobiDBLite consensus disorder prediction 54 78 - -
Lapu11g00518 976 ProSiteProfiles PAC domain profile. 519 573 IPR000700 -
Lapu11g00518 976 FunFam LOV domain-containing protein 434 598 - -
Lapu11g00518 976 Pfam PAS domain 468 560 IPR000014 -
Lapu11g00518 976 Pfam PAS domain 186 282 IPR000014 -
Lapu11g00518 976 SMART pas_2 167 236 IPR000014 -
Lapu11g00518 976 SMART pas_2 447 516 IPR000014 -
Lapu11g00518 976 SUPERFAMILY PYP-like sensor domain (PAS domain) 461 560 IPR035965 -
Lapu11g00518 976 ProSiteProfiles Protein kinase domain profile. 646 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00518 976 MobiDBLite consensus disorder prediction 422 441 - -
Lapu11g00518 976 ProSiteProfiles PAS repeat profile. 445 518 IPR000014 -
Lapu11g00518 976 NCBIfam PAS domain S-box protein 192 286 IPR000014 -
Lapu11g00518 976 NCBIfam PAS domain S-box protein 470 560 IPR000014 -
Lapu11g00518 976 SUPERFAMILY Protein kinase-like (PK-like) 629 953 IPR011009 -
Lapu11g00518 976 Gene3D PAS domain 179 335 - -
Lapu11g00518 976 ProSiteProfiles PAC domain profile. 239 293 IPR000700 -
Lapu11g00518 976 MobiDBLite consensus disorder prediction 332 395 - -
Lapu11g00518 976 Gene3D PAS domain 434 598 - -
Lapu11g00518 976 FunFam LOV domain-containing protein 645 729 - -
Lapu11g00518 976 ProSiteProfiles PAS repeat profile. 165 236 IPR000014 -
Lapu11g00518 976 MobiDBLite consensus disorder prediction 1 80 - -
Lapu11g00518 976 Pfam Protein kinase domain 649 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00518 976 CDD STKc_phototropin_like 645 952 - -
Lapu11g00518 976 MobiDBLite consensus disorder prediction 419 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00518 Lapu-Chr11 8556363 8569024 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00518 4 976 AGC Kinase Gene Family AT3G45780 69.578 0.0 1332
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu11g00518 Pkinase 2.3e-64 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00518 K20715 - gmx:100804524 1795.4