Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00517 ATGGGTTGCTTTTGTTGCGCAGGGAAATCAAGCACCAATTCCGATATCGAAGACTATGACGACAACTTCGACCACAAACCCTCCAATTTCACTGCCGCAGAAAGCGTCAAAGTTGATTTCAAAGTGAATGGGAAAAAGGAAGAAGGTTCTAAAGGTGATCAGCTTGCTCTCGACGTGAAGAATTTAAATTTGAAAGAGGAGGGTTCTCAGGATGGAAAAGATAATGGCAATCGGGCTCAGTCATTCAGTTTTAATGAACTTGAAGCTGCGACGGGAAATTTTACGGCAGATTGTTTTTTGGGTGAAGGAGGCTTTGGCAAGGTTTACAAGGGACACATGGAGAGAATAAACCAGGTTGTAGCTATAAAGCAACTTGACCCTAATGGACTTCAAGGGATTCGGGAATTCGCTGTTGAAGTGTTGACATTGAGTTTGGCAGACCACCCTAATCTTGTCAAGTTGATTGGATTTTGTGCAGAGGGAGAGCAGAGGCTATTAGTTTATGAATTCATGCCATTGGGGTCTTTGGAGAACCACTTGCTTGATCTTCGGCCCGGTAGCAAACCATTGGATTGGAACACAAGAATGAAAATAGCAGCTGGGGCAGCTAGGGGTTTGGAGTATCTGCACGATAAAATGAAGCCTCCTGTCATTTACCGCGACTTGAAATGCTCTAACATTTTGTTAGGGGAGGGATATCATCCTAAGTTGTCAGATTTTGGCCTGGCAAAAGTAGGCCCAAGTGGTGATAAGACCCATGTTTCAACAAGGGTTATGGGCACATATGGGTATTGTGCCCCAGATTATGCAATGACGGGTCAGTTGACATTTAAGTCAGATATTTACAGCTTTGGGGTTGTTCTTTTGGAGCTTATTACAGGCCGGAAGGCTATTGATCATATGAAACCTGCCAAAGAGCAAAATCTAGTTGCATGGGCACGACCCTTGTTCAGAGATAGGAAAAAATTTCCTCAAATGGTTGACCCTTTACTTGAAGGTCGATATCCCGTGAGAGGCTTGTACCAAGCACTTGCCATTGCTGCAATGTGTGTTCAAGAGCAGCCTAATATGCGGCCTGTTATAGTTGATGTAGTTACAGCTCTAAATTACCTAGCTTCTCAGAAGTATGATCCTCAACTTCATCCAGCACAAAGCTCTAGAAGAAGTCCACCTTCTCAGGTAATGCAAAGGGATGATGATGATGAACGTAGACTTATTTTAAGCTCAGAGCATGTGACAGACAGATCTTAA 1251 0.4349 MGCFCCAGKSSTNSDIEDYDDNFDHKPSNFTAAESVKVDFKVNGKKEEGSKGDQLALDVKNLNLKEEGSQDGKDNGNRAQSFSFNELEAATGNFTADCFLGEGGFGKVYKGHMERINQVVAIKQLDPNGLQGIREFAVEVLTLSLADHPNLVKLIGFCAEGEQRLLVYEFMPLGSLENHLLDLRPGSKPLDWNTRMKIAAGAARGLEYLHDKMKPPVIYRDLKCSNILLGEGYHPKLSDFGLAKVGPSGDKTHVSTRVMGTYGYCAPDYAMTGQLTFKSDIYSFGVVLLELITGRKAIDHMKPAKEQNLVAWARPLFRDRKKFPQMVDPLLEGRYPVRGLYQALAIAAMCVQEQPNMRPVIVDVVTALNYLASQKYDPQLHPAQSSRRSPPSQVMQRDDDDERRLILSSEHVTDRS* 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00517 416 ProSitePatterns Protein kinases ATP-binding region signature. 100 123 IPR017441 GO:0005524
Lapu11g00517 416 PANTHER OS07G0668900 PROTEIN 51 379 - -
Lapu11g00517 416 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
Lapu11g00517 416 FunFam Serine/threonine-protein kinase PBS1 171 386 - -
Lapu11g00517 416 Pfam Protein tyrosine and serine/threonine kinase 99 310 IPR001245 GO:0004672|GO:0006468
Lapu11g00517 416 MobiDBLite consensus disorder prediction 393 416 - -
Lapu11g00517 416 Gene3D Transferase(Phosphotransferase) domain 1 171 388 - -
Lapu11g00517 416 CDD STKc_IRAK 100 369 - -
Lapu11g00517 416 MobiDBLite consensus disorder prediction 379 416 - -
Lapu11g00517 416 Gene3D Phosphorylase Kinase; domain 1 79 170 - -
Lapu11g00517 416 FunFam probable serine/threonine-protein kinase RLCKVII 66 170 - -
Lapu11g00517 416 SUPERFAMILY Protein kinase-like (PK-like) 80 391 IPR011009 -
Lapu11g00517 416 ProSiteProfiles Protein kinase domain profile. 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00517 416 SMART serkin_6 94 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00517 Lapu-Chr11 8544751 8552073 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00517 60 373 Glycoside Hydrolase AT3G07070 62.025 5.37e-145 417
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lapu11g00517 PK_Tyr_Ser-Thr 4.3e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00517 - - gmx:100804000 758.059