Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00514 ATGTTAGATCTTAATCTCAATGCGGAGTGGGCCGATTCGGTTCGTAACGGCGAATCGCCGTTACCGTTAGAGAAGTTTCCTGAAGGTTCGCGGAACCAAATGGCGGAGTCAGGGACTTCAAATTCCTCCGTGGTGAATGCGGACGGGTCGAGTAACGGCGGCGGCGACGAGGACTCGTGCTCGACGCGCGCTGATGACGTCTACACCTTCAATTTCGATATCCTTAAAGTGGAAGGCGCGAACGACGTCGTAACGAAGGAGCTGTTTCCGGTGAGTGTAGGAGTGACTACGTCGTCGTTTTCAGCGAGGAATGGTTTCGTGGATCTCGCGTTCGATCGTGAGGGAGGGAACAGTGAGATAAAGTTGCTTCAGCCGCAACCTCAGACTCAGACTCAGCAACCGGCGAAGAAGAGTAGGAGAGGACCAAGGTCTCGAAGCTCACAGTACAGAGGGGTTACCTTTTATAGAAGGACGGGAAGATGGGAATCGCATATCTGGGATTGCGGGAAACAAGTCTATTTGGGTGGATTTGACACGGCTCATGCTGCTGCTAGAGCTTATGATCGAGCTGCTATTAAGTTCAGGGGAGTTGATGCTGACATCAATTTTAATCTGAGTGATTATGAGGATGATCTTAAGCAGATGAAGAATTTGTCCAAGGAGGAATTCGTGCATATACTGCGCCGCCAAAGTACTGGTTTCTCAAGAGGAAGTTCTAAATACCGAGGAGTTACTCTCCACAAGTGTGGCCGCTGGGAAGCTCGAATGGGACAATTCCTTGGCAAAAAGGCTTATGACAAGGCAGCTATCAAATGCAACGGAAGGGAAGCAGTGACCAACTTTGAGCCAAGTACATATGAAGAAGAGAAGAAATCTGCAGCCATTAACGAAGATGCCAATCAGAATCTTGATCTCAATTTGGGCATAGCGACCCCAGGACCTGGTCCCAAAGAAAATTGGCAGCAAATTCAGTTCCCCTCTGCCCCTTACAACACGCATGGTGGAATAAGTTCAATGATGGAAACCAATGTTAATTCAGGAATTGGTAATCCTTCTTTGAAAAGACTAGTTGTAAGTGAAGATTGTCCTTCTGTATGGAATGGAATGTGTCCTAGTTTCTTTCCCAATGAGGAAAAAGCACAGAGAATGAACATGGATCATTCAAATGGACTCCGCAATTGGGCGTGGCAATCAGATGCCCAGGTCAATGCTACCCCAGTACCAACGTTCTCTGCTGCAGCATCATCAGGATTCTCAATTTCAGCTACCTTTCCATCCACTGCCACCTTTCCAACAAGATCTATGAACTCCAATCCCCAGAGCCTCTGTCTTACTTCATCCAGCGCGCATTCCGGCAATGCCTCGGAATATTATTACCAGGTTAAGCCCCCGCAGGCACCACTATAA 1407 0.4805 MLDLNLNAEWADSVRNGESPLPLEKFPEGSRNQMAESGTSNSSVVNADGSSNGGGDEDSCSTRADDVYTFNFDILKVEGANDVVTKELFPVSVGVTTSSFSARNGFVDLAFDREGGNSEIKLLQPQPQTQTQQPAKKSRRGPRSRSSQYRGVTFYRRTGRWESHIWDCGKQVYLGGFDTAHAAARAYDRAAIKFRGVDADINFNLSDYEDDLKQMKNLSKEEFVHILRRQSTGFSRGSSKYRGVTLHKCGRWEARMGQFLGKKAYDKAAIKCNGREAVTNFEPSTYEEEKKSAAINEDANQNLDLNLGIATPGPGPKENWQQIQFPSAPYNTHGGISSMMETNVNSGIGNPSLKRLVVSEDCPSVWNGMCPSFFPNEEKAQRMNMDHSNGLRNWAWQSDAQVNATPVPTFSAAASSGFSISATFPSTATFPTRSMNSNPQSLCLTSSSAHSGNASEYYYQVKPPQAPL* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00514 468 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 118 315 - -
Lapu11g00514 468 CDD AP2 239 284 IPR001471 GO:0003700|GO:0006355
Lapu11g00514 468 SUPERFAMILY DNA-binding domain 147 205 IPR016177 GO:0003677
Lapu11g00514 468 Gene3D AP2/ERF domain 147 205 IPR036955 GO:0003700|GO:0006355
Lapu11g00514 468 Gene3D AP2/ERF domain 239 283 IPR036955 GO:0003700|GO:0006355
Lapu11g00514 468 MobiDBLite consensus disorder prediction 119 149 - -
Lapu11g00514 468 Pfam AP2 domain 148 196 IPR001471 GO:0003700|GO:0006355
Lapu11g00514 468 MobiDBLite consensus disorder prediction 121 137 - -
Lapu11g00514 468 MobiDBLite consensus disorder prediction 16 60 - -
Lapu11g00514 468 CDD AP2 148 206 IPR001471 GO:0003700|GO:0006355
Lapu11g00514 468 SMART rav1_2 240 288 IPR001471 GO:0003700|GO:0006355
Lapu11g00514 468 SMART rav1_2 148 210 IPR001471 GO:0003700|GO:0006355
Lapu11g00514 468 SUPERFAMILY DNA-binding domain 239 283 IPR016177 GO:0003677
Lapu11g00514 468 ProSiteProfiles AP2/ERF domain profile. 148 204 IPR001471 GO:0003700|GO:0006355
Lapu11g00514 468 MobiDBLite consensus disorder prediction 32 58 - -
Lapu11g00514 468 FunFam AP2-like ethylene-responsive transcription factor 147 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00514 Lapu-Chr11 8444632 8449042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00514 1 429 AP2-EREBP Transcription Factor Family AT5G60120 46.421 2.25e-101 310
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Lapu11g00514 AP2 6.7e-10 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00514 K09284 - gmx:100788303 776.548