Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00502 ATGGAGAGCAGTGACACATACACCCCTACTTCCTCTGCCCCACTTTCTCACTCCCCCACTTCCTCTTCTTCCTCACCACCACCTCCCACCATTGTCATGAGCCCTTGTGCTGCATGCAAGATTTTGAGGAGAAGATGTGCTGAGAAATGTGTTTTGGCACCTTATTTTCCTCCCACTGAACCTACCAAGTTTACCATTGCTCACCGTGTATTTGGTGCCAGCAACATCATCAAGTTCCTACAGGAACTTCCAGAGTGTCAGAGGGCTGATGCAGTAACCAGCATGGTTTATGAGGCCAGTGCAAGAATAAGAGACCCTGTTTATGGTTGTGCAGGAGCAATTTGCCATCTTCAGAAGCAGGTGAATGAACTTCAAGCACAATTGGCCAAGTCACAAGCTGAGCTTGTAACCATGCAGCTTCAGCAAGCCAATCTTGTGGCTCTAATTTGCATGGAAATGGCACAGAGTCCAGAGGAATCACCACAACAATCAGTGGACAATTTCATTTCAACTCCTCCTCACAGTGGTGGCTATCAAAGTGGCACGAACTTCTTTGAGGAGAACACTGGCCCAAACTCCCTATGGGAGCCCCTTTGGACTTGA 603 0.4809 MESSDTYTPTSSAPLSHSPTSSSSSPPPPTIVMSPCAACKILRRRCAEKCVLAPYFPPTEPTKFTIAHRVFGASNIIKFLQELPECQRADAVTSMVYEASARIRDPVYGCAGAICHLQKQVNELQAQLAKSQAELVTMQLQQANLVALICMEMAQSPEESPQQSVDNFISTPPHSGGYQSGTNFFEENTGPNSLWEPLWT* 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00502 200 MobiDBLite consensus disorder prediction 180 200 - -
Lapu11g00502 200 Coils Coil 121 141 - -
Lapu11g00502 200 MobiDBLite consensus disorder prediction 1 20 - -
Lapu11g00502 200 ProSiteProfiles LOB domain profile. 34 135 IPR004883 -
Lapu11g00502 200 MobiDBLite consensus disorder prediction 1 29 - -
Lapu11g00502 200 Pfam Lateral organ boundaries (LOB) domain 35 132 IPR004883 -
Lapu11g00502 200 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 34 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00502 Lapu-Chr11 8289459 8291567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00502 31 200 AS2 family AT1G07900 63.584 1.93e-76 226
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lapu11g00502 LOB 1.6e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00502 11 8289459 8291567 Lapu11g00502 11 8289459 8291567 ECH