Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00496 ATGGGGAAGAAGAAGCAGAAAGTCGTTCTACCGCCGGAGCTTCCTCCGGAGATTCCGGACGACGAAGTTGAGGTTTCCGACGATGACCTCAAATTCATCAAAGAGAATCGCAGTTATGCTTCCTTGCTCTCCACCTTGGACACCCATTCAATCACCAAGCATGTTACTCGGGTTGCTGATGCCAAAGACGATGCATTGGAGAAACTTTATGAGAAACGCATGCAAAAAAATGCTCTGAAGAAAGAAAAAGAAGAAACTGGTTTGCAGGTTGATCGTGTAGATGCTCTTCCAATCAAGACATTGGATGGAAAACTCCATTACCGGACAGCTACAAAGACCATATCAGAACATGATATGAGTGAAGAGGGAACTGCAGAGGATGTCAATGGGGATGAAGGTATGGTGAAGCTAACTAAGGCTGAAAAGAGAGCCAAACTTAAGAAAATGAAAAAAGAGGCCAAAAAACAAGGGAAAGAAGTGGCAAAAGCAGAAGTGGAAGAGACACCACAAGCAGCAGTACTGGCTGAGGTCAAGCAAGATCTTACAGCTGAGGAGGCATTTGAAAGTAAGAAGTATAAACTTGCAGAATTGGGGAATGCCTTGCTTACAGATCCAGAGTCCAACATTAAATTTCTGAAAGACATGGTGCAGTTATCTAAAGATAGCGATCATACTATTGTTAAACTTGGACTTCTATCCCTCTTGGCTGTTTTCAAAGATATTGTCCCTGGCTATCGGATCAGGCTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCAAAGACTGTTAGAAAGATGCGTTATTATGAGTCTACTCTTCTTTCAGCATACAAGGTATATTTGCAAAGGCTGGTAGCCATAGAGAAGAAGCCTTTATTTCGACATGTAGCAGTTCGTTGTATTTGTTCTTTGCTTGATGCAAATCCCCATTTCAACTTTCGTGAAAGTTTGTTGGATGCTACTGTCAGAAACATAAGCTCTACTGATGAGGCCATAAGGAAACTTTGTTGTTCCACAATTAAATCCCTCTTTACAAATGAGGGTAAACATGGGGGCGAAGTTACTGTTGAGGCTGTTCGATTGATTGCTGATTATGTTAAAGCTTACAATTGCCAATTGCACCCAGATTCTGTTGATGTTTTCTTGTCCCTTTCATTTAATCAGGATCTCTTGAAGTCTGGAAAGATAGAAGAGGATCAGAAATTAAAAGATAAGAAAAGTAAGAAAAGGAAACACTTGGAGGCATCAAATCAGTTGGTGGAGAATGATAGAAAGAAAAGTAGGCAAGAATTGATTTCTAAGACAAGAGAGGAGGTTGAAGCTGATTACAAGGCTGCATCCTTTGCCCCAGATGTTATGGAGAGGAAACAGATGCAAACTGAAACACTCTCTGCTGTCTTTGAGACATACTTTCGTATTTTGAAGCATACAATGCAGTCCATAGGTGCCAGGCCTGAAGCTAACGACGGGGCATTATCTGCTGCAGTGGAACCCCTCCCTTTGCTTGCTCCATGTCTGAAAGGACTGGCAAAATTTTCACATCTGATTGACCTTGATTTCATGGGTGATCTAATGAACCATCTCAAAGTACTTGCTTCTGGAAGCATCAACTCAGGCAACACTTCTGACAAGTGTTCTAAATGTTTGACTGTATCGGAACGTCTGCAATGCTGCATCGTTGCTTTTAAAGTGATGAGGAACAATCTTGATGCCTTGAATGTTGATTTACAGGACTTCTTTATCCATCTTTACAATCTTGTACTTGAATACAGACCAGGAAGAGATCAAGGAGAGGTGTTGGCAGAAGCTTTGAAGATAATGTTGTGCGATGATAAGCAACATGACATGCAAAAGACTGCTGCATTTATAAAAAGATTAGCAACATTTTCACTGAGTGTTGGATCAGCAGATTCCATGGCTGCCTTGGTCACAGTAAAGCATCTTCTTCAGAAGAATGTCAAGTGCAGAAATTTGTTGGAAAATGACATCGGGGGAGGCTCTGTTTCTGGCACAATTCCTAAATATCTACCATATTCCACAGACCCCAATTTAAGTGGTGCCCTTGCCTCGGTACTTTGGGAGCTCAATCTTTTGTCAAACCATTATCATCAAGCCATATCAACACTGGCCTCGGGCATTTCAAGCATGAGTACTGCACATAACCAGGTCCTTTTATCCAAGTCCTCTCCTCAACTAGCTTTTAAGGAATTGTCTCTGGACCAGGAATTATGTTTCACACAACAAACTGGCAGTATAAAATTAAATAACAAGCGGAGAAGAACAAATGGCCCTGCTGCATCACCTTCCATGGGTTCTACAACTGTAATGAGTTCCTTTGATGAGAATGAGTTGCAGAGGAAACTTAGTTCCCATTTTATGGTTCATCATGACATCAAGGAAAATGAAAGGTTGAGAAAGGAGCTGGACAGGACTGCACGATCGCTACAGCTATATAAACAATACAAGAAACAAAAGAAACGATCAAAACCAAGGAGATGA 2499 0.4126 MGKKKQKVVLPPELPPEIPDDEVEVSDDDLKFIKENRSYASLLSTLDTHSITKHVTRVADAKDDALEKLYEKRMQKNALKKEKEETGLQVDRVDALPIKTLDGKLHYRTATKTISEHDMSEEGTAEDVNGDEGMVKLTKAEKRAKLKKMKKEAKKQGKEVAKAEVEETPQAAVLAEVKQDLTAEEAFESKKYKLAELGNALLTDPESNIKFLKDMVQLSKDSDHTIVKLGLLSLLAVFKDIVPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKVYLQRLVAIEKKPLFRHVAVRCICSLLDANPHFNFRESLLDATVRNISSTDEAIRKLCCSTIKSLFTNEGKHGGEVTVEAVRLIADYVKAYNCQLHPDSVDVFLSLSFNQDLLKSGKIEEDQKLKDKKSKKRKHLEASNQLVENDRKKSRQELISKTREEVEADYKAASFAPDVMERKQMQTETLSAVFETYFRILKHTMQSIGARPEANDGALSAAVEPLPLLAPCLKGLAKFSHLIDLDFMGDLMNHLKVLASGSINSGNTSDKCSKCLTVSERLQCCIVAFKVMRNNLDALNVDLQDFFIHLYNLVLEYRPGRDQGEVLAEALKIMLCDDKQHDMQKTAAFIKRLATFSLSVGSADSMAALVTVKHLLQKNVKCRNLLENDIGGGSVSGTIPKYLPYSTDPNLSGALASVLWELNLLSNHYHQAISTLASGISSMSTAHNQVLLSKSSPQLAFKELSLDQELCFTQQTGSIKLNNKRRRTNGPAASPSMGSTTVMSSFDENELQRKLSSHFMVHHDIKENERLRKELDRTARSLQLYKQYKKQKKRSKPRR* 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00496 832 PIRSF Noc3 1 829 IPR016903 -
Lapu11g00496 832 MobiDBLite consensus disorder prediction 1 22 - -
Lapu11g00496 832 Pfam CBF/Mak21 family 555 710 IPR005612 -
Lapu11g00496 832 SUPERFAMILY ARM repeat 205 613 IPR016024 -
Lapu11g00496 832 Coils Coil 66 86 - -
Lapu11g00496 832 MobiDBLite consensus disorder prediction 754 774 - -
Lapu11g00496 832 MobiDBLite consensus disorder prediction 411 429 - -
Lapu11g00496 832 Pfam Nucleolar complex-associated protein 190 280 IPR011501 -
Lapu11g00496 832 Coils Coil 139 166 - -
Lapu11g00496 832 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 819 IPR016903 -
Lapu11g00496 832 Coils Coil 410 430 - -
Lapu11g00496 832 MobiDBLite consensus disorder prediction 401 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00496 Lapu-Chr11 8181982 8192645 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00496 1 808 Core DNA Replication Machinery Family AT1G79150 58.486 0.0 909
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00496 K14834 - gmx:100776136 1345.87