Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00476 ATGGGGAAGAAGCAGAAAATCGTTCTTCCACCGGAGCTTCCGCCGGAGATCCCAGAGGACGAAGTTGAAGTTTCCGACGATGACCTCCAATTTATCAAAGAGAATCGCAGCTATGCCTCCTTGCTCTCCACCTTGGATACCCATTCAATCACCAAGCATGTCACACGGGTTGCTGATGCCAAAGATGATGCATTGGAGAAACTTTATGAGAAACGCATGCATAAAAATGCTCTCAAGAAAGAAAAAGAAGAAACTGGTTTGCAGGTTGATCGTGCTGATGCTCTTCCAATCAAGACATTGGATGGAAAACTCCATTACCGGACAGCTTCAAAGACAATATCAGAAAATGATCTAAGTGAAGAGGGAACTGCAGAGGATGCCATTGCAGACGAAGGCATGGTGAAGCTAACGAAGGCTGAAAAGAGGGCCAAACTTAAGAAAATGAAAAAGGAGGCCAAAAAACAAGGGAAAGAAGTGGCTAAAGCAGAAGTGGAAGAGACACCCCAAGCAGCAGTCCTGGCTGAGATAAAAGAAGATCTTACAGCTGAGGAGGCATTTGAAAGTAAGAAGTGTAAACTTGCTGAATTGGGGAGTGCTTTGCTTACAGACCCAGAGTCCAATATTAAACTTCTGAAAGAGATGGTGCAGATATCTAAAGATAATAATCATACCATTGTTAAACTAGGACTTCTATCCCTCTTGGCTGTTTTCAAAGATATTATCCCTGGTTATCGGATCAGGCTTCCTACTGAAAAGGAACTAGAAATGAAGGTTTCAAAGACTGTTAGAAAGATGCGTTATTATGAATCAACTCTTCTTTCAGCATACAAGACGTACCTGCAAAGACTGATGGCCTTAGAGAAGAAGCCTCTATTTCAGCATGTAGCAGTTCGTTGTATTTGTTCTTTGCTTGATGCTAATCCCCATTTCAACTTTCGTGAAAGTTTGTTGGACGCTACTATCAGAAACATAAGCTCTACTAATGAGGCTATAAGGAAGCTTTGTTGTTCCACAATTAAATCACTCTTTACAAATGAGGGTAAACATGGGGGTGAAGTTACTGTAGAGGCTGTTCGATTGATTGCTGATCATGTTAAAGCTCATAATTGCCAATTTCACCCGGATTCTGTTGATGTTTTCTTGTCCCTTTCATTTAATGTGGATCTCTTGAAGTCTGAAAAGATAGAAGAGGATCAGAAATTGAAAAACAAGAATAGTAAGAAAAGGAAAAACTTGGAGGCATCAAATCCGTTGGTGGAGAATGATAGAAAGAAAAGTAGACAAGAATTGATTTCTAAAACAAGAGAGGAGGTTGAAGCTGACTACAAGGCTGCATCTTTTGCCCCAGATGTTATGGAGCGGAGACAGATGCAAACTGAAACACTCTCAGCTGTCTTTGAGACATACTTTCGCATTTTGAAGCATACAATGCAGTCCATAGGTGCCAGGCCTGAAGCAAATGCCGGGGCATTATCTGCTGCAGTGGAACCCCTCCCTTTGCTTGCTCCATGTCTGAAAGGATTGGCAAAATTTTCACATCTTATTGACCTTGATTTCATGGGTGATTTAATGAACCATCTGAAAGCACTTGCTTCTGGAAGTAGCTACTCAGGAAACACTTCAGACAAGTGTTTTAAATGTTTGACTGTGTCAGAACGTCTCCAATGTTGCATAGTTGCTTTTAAAGTGATGAGGAACAATCTTGATGCCTTAAATGTTGATTTACAGGACTTTTTTATCCACCTTTACAATCTTGTTCTTGAATACAGGCCTGGAAGAGATCAAGGAGAGACTTTGGCAGAAGCTTTGAAAATAATGTTGTGCGATGATAAGCAACATGACATGCAAAAGACTGCTGCGTTTATAAAAAGATTAGCGACAATTTCACTGTGTGTTGGATCAGCGGATTCCATGGCTGCCTTGGTCACCGTAAAGCATCTCCTTCAGAAGAATGCTAAGTGCAGAAATTTGTTGGAAAATGACATTGGTGGGGGCTCTGTTTCTGGCACGATTCCTAAGTATTTACCATATTCTACAGACCCTAATTTAAGCGGTGCCCTTGCCTCAGTACTTTGGGAACTCAATCTTTTGTCCAGCCATTATCATCCAGCTATATCAACACTGGCCTCGGGCATCTCAAGTATGAGTACTGCACATAACCAGGTCCTTTTATCCAAGTCCTCTCCTCAACTAGCTTTTCAGGAAATGTCTCTGGACCGGGAATTATGTTTCACACAACAAAGTGGCAGTATAAAATTAAATAACAAGCGGAGAAGAACAAATGGCCCTGCTACATCACCTTCCATTGGTTCTATAACTGTAACGAGCTCCTTTGATGACAATGAGTTGCAGAGGAAACTTAGTTCCCATTTTATGGTTCATCATGACATCAAGGAGAATGAAAGGTTGAGAAAGGAGCTGGACAGGACTGAACTATCGCTACAGCTATATGAACAATATAAGAAACAAAAGAAACGATCAAAACCAAGGAAATGA 2496 0.4111 MGKKQKIVLPPELPPEIPEDEVEVSDDDLQFIKENRSYASLLSTLDTHSITKHVTRVADAKDDALEKLYEKRMHKNALKKEKEETGLQVDRADALPIKTLDGKLHYRTASKTISENDLSEEGTAEDAIADEGMVKLTKAEKRAKLKKMKKEAKKQGKEVAKAEVEETPQAAVLAEIKEDLTAEEAFESKKCKLAELGSALLTDPESNIKLLKEMVQISKDNNHTIVKLGLLSLLAVFKDIIPGYRIRLPTEKELEMKVSKTVRKMRYYESTLLSAYKTYLQRLMALEKKPLFQHVAVRCICSLLDANPHFNFRESLLDATIRNISSTNEAIRKLCCSTIKSLFTNEGKHGGEVTVEAVRLIADHVKAHNCQFHPDSVDVFLSLSFNVDLLKSEKIEEDQKLKNKNSKKRKNLEASNPLVENDRKKSRQELISKTREEVEADYKAASFAPDVMERRQMQTETLSAVFETYFRILKHTMQSIGARPEANAGALSAAVEPLPLLAPCLKGLAKFSHLIDLDFMGDLMNHLKALASGSSYSGNTSDKCFKCLTVSERLQCCIVAFKVMRNNLDALNVDLQDFFIHLYNLVLEYRPGRDQGETLAEALKIMLCDDKQHDMQKTAAFIKRLATISLCVGSADSMAALVTVKHLLQKNAKCRNLLENDIGGGSVSGTIPKYLPYSTDPNLSGALASVLWELNLLSSHYHPAISTLASGISSMSTAHNQVLLSKSSPQLAFQEMSLDRELCFTQQSGSIKLNNKRRRTNGPATSPSIGSITVTSSFDDNELQRKLSSHFMVHHDIKENERLRKELDRTELSLQLYEQYKKQKKRSKPRK* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00476 831 SUPERFAMILY ARM repeat 205 611 IPR016024 -
Lapu11g00476 831 Pfam Nucleolar complex-associated protein 189 279 IPR011501 -
Lapu11g00476 831 PIRSF Noc3 2 828 IPR016903 -
Lapu11g00476 831 MobiDBLite consensus disorder prediction 1 22 - -
Lapu11g00476 831 Coils Coil 138 165 - -
Lapu11g00476 831 MobiDBLite consensus disorder prediction 400 428 - -
Lapu11g00476 831 Coils Coil 800 820 - -
Lapu11g00476 831 PANTHER NUCLEOLAR COMPLEX PROTEIN 3 3 818 IPR016903 -
Lapu11g00476 831 Pfam CBF/Mak21 family 554 709 IPR005612 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00476 Lapu-Chr11 8024430 8032354 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00476 1 811 Core DNA Replication Machinery Family AT1G79150 58.080 0.0 914
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00476 K14834 - gmx:100794797 1355.5