Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00468 ATGGCTTCTTCCAACACTCCCAAACCCCACAAATCTCCCAAAGCCAAAAATGGAGAAATCTCAACAACCCAAACTAAAGCTAAGAAGAAGAATCGAAACATCGCAAAGGAGGAGAACGAAAAGAAGAAGAATAAGAAGCCCAAGCTCAGCAACGGCAATTCAAAACAGTCACACAAAAAGGGTGCAGAAGGAAGCGGTGAAGATGCGAAAGCCAACGTCTTTCCCATGAATCGTATCAGGACCATGATCAAGGGCGAAGATCCTGATATGCGTCTTTCGCAGGAAGCGGTGTTAGCCATCAACAATGCTGTGGGGAAGTTCCTTGAGCAATTCACGCAGGATGCTTATGCTTGTTGTGTTCAGGACCGGAAGAAATGCCTGAATTACAAGCACGTTGCAAATGTTGTTAGTAAGAAGAGGAGATATGACTTTCTTTCCGATTTTGTTCCTGAGAAAGTGAAAGCTGAGGATGCATTAAGAGAGAGAAATGCAGTAGGCAATGGAGTATTTCAGAAAATCTAA 522 0.4349 MASSNTPKPHKSPKAKNGEISTTQTKAKKKNRNIAKEENEKKKNKKPKLSNGNSKQSHKKGAEGSGEDAKANVFPMNRIRTMIKGEDPDMRLSQEAVLAINNAVGKFLEQFTQDAYACCVQDRKKCLNYKHVANVVSKKRRYDFLSDFVPEKVKAEDALRERNAVGNGVFQKI* 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00468 173 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 74 136 IPR003958 -
Lapu11g00468 173 SUPERFAMILY Histone-fold 30 145 IPR009072 GO:0046982
Lapu11g00468 173 Gene3D Histone, subunit A 11 151 IPR009072 GO:0046982
Lapu11g00468 173 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 39 164 - -
Lapu11g00468 173 MobiDBLite consensus disorder prediction 1 22 - -
Lapu11g00468 173 Coils Coil 20 45 - -
Lapu11g00468 173 MobiDBLite consensus disorder prediction 23 47 - -
Lapu11g00468 173 MobiDBLite consensus disorder prediction 1 76 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00468 63 132 CCAAT-HAP5 Transcription Factor Family AT1G07980 41.429 3.33e-15 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00468 - K03506 gmx:100793738 198.749