Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00440 ATGATGTATGATCTTGTTGCCTCAGTTTCTGTGTCGAGTTTTAGTAAGAACCTTGTCATTGATCCTACTTTGGAGGAGGAAAACTGCCAAGATGGTAGCTTAATGATTACATGCATGCCTTCTCGCTATGAAATCACCCAACTCACCGTTACTGGGGAATGGTCTTCCCCGAAGATTAACGAGGGAATGCAGCTGTGCTTGGATGCTTGTGCGAAGCTTGCGAAGATTATGAGATTTCAAGATGACCCTGAATTAGTAAAATTGCGGACAACAAACGGTGGCAAGGGAATCAGGCGCAATGGAACACGAGTAGCTAGAGTATTGTCAAGAGTATTCTCAGAGGATTATGAGAGAGTTAGAAAAAGAACATTATTAGATCCTCGGGGACAAACCATTCACCGATGGAACAAAATTTTCTTGGTAGCATGTTTAGTTTCTTTGTTTGTGGACCCTCTATTCTTTTATTTACCACTAGTTCGAGATGAAGTGTGTATTGATATTGGAACAGCCCTGGAAGTTTTCCTCACAATAATAAGATCAATGGCAGATGTGTTTTACATGATTCAGATTCTCATGAAGTTTCGAACAGCTTATGTTGCTCCTTCTTCTCGAGTATTTGGGAGGGGAGAACTTGTCATAGACACTACCAAGATAGCTACTAGGTACCTGAGAAAGGATTTTGGGCTAGACTTCATTGCCGCATTGCCTCTTCCTCAGGTGTTAATTTGGATTGTAATCCCCAATCTTGGAGGTTCAACCATGGCAAACACAAAGAATGTGCTTCGCTTTATCATCATTTTCCAATATTTACCAAGGCTGTTTCTTATTTTTCCACTTTCATCCCAAATTGTAAAAGCTACAGGGGTTGTGACAGAAACAGCATGGGCAGGGGCTGCTTACAACTTGGTTCTGTACATGTTGGCTAGCCATTTTTTAGGAGCTAGCTGGTATCTTCTATCAATTGAACGACAAGAAGCGTGCTGGAGGAGTGTCTGCGATATGGAGCCATCTTGTCAATATGGATTCTTTGACTGCAAAAGGGTTGAAGACTCCTTCAGGGTCTCCTGGTTTATAGCAAGTAATATCACAGTTTTATGCTCACCAAAGGCTAACTTCTATCAGTTTGGTATATACGGTGATGCTGTGACATCCCAAGTTACTACCTCATCATTCTTTCACAAATACTTCTTTTGTCTTTGGTGGGGCCTAAGGAATCTGAGTTCATTGGGACAAGGTCTTCTTACTAGCACTTTTGTTGGAGAAATAATGTTTGCCATCGTTGTTGCAACCCTTGGACTGGTTCTTTTCGCATTGCTTATTGGCAATATGCAGACATATCTCCAATCAACAACTGTTCGCTTAGAAGAGTGGAGGGTGAGGAGAACTGACACAGAACAATGGATGCATCACAGGCAGCTACCCCCAGAACTCAGGCAATCTGTGCGCAAATATAACCAATATAAATGGCTGGCCACACGAGGGGTAGATGAAGAAGCTCTTCTCAAAGGACTTCCTGCAGATCTTCGGAGAGACATCAAGCGCCACCTTTGTCTCGAACTAGTTCGACGAGTACCATTGTTCGATCAAATGGACGAGAGAATGCTTGACGCGATATGCGAGAGGCTGAAGCCGGCACTGTGCACGGAGAACACGTACCTAGTTCGGGAGGGCGATCCCGTGAACGAAACTCTCTTCATAATCAGAGGCCACCTTGATTCCTACACCACCAACGGAGGCCGCTCCGGTTTCTTCAACTCGTGCCGTATAGGCCCCGGCGATTTCTGCGGCGAGGAGCTGCTGACATGGGCCTTGGGCCCACGGCCCAGCTTCATCCTGCCCTCCTCCACTCGAACCGTCAAGGCCATCTCCGAAGTGGAGGCCTTCGCCCTCATAGCCGAAGATCTCAAGTTCGTGGCGTCACAGTTCAGAAGATTGCACAGCAAACAACTCAGACACAAGTTCAGGTTTTACTCGCACCAGTGGAGAACGTGGGCTGCATGTTTCATACAAGCTGCATGGAGACGTTACAAGAAGCGAAAGGAAGTTGCAGAACTGAGAGCTTTGAGCTACGTTGAGTCTATGAGTGAGGGTGAAACAGTAGGGTTGGTTGTGTATGGTACGAGGATGACTAGGAAGAGTACTGTGCATTCTGATGGAGTTGTCAAGTCTTTGCAGAAGCCAGAAGAACCAGATTTTTCTGTTGGTGAGTGA 2211 0.4541 MMYDLVASVSVSSFSKNLVIDPTLEEENCQDGSLMITCMPSRYEITQLTVTGEWSSPKINEGMQLCLDACAKLAKIMRFQDDPELVKLRTTNGGKGIRRNGTRVARVLSRVFSEDYERVRKRTLLDPRGQTIHRWNKIFLVACLVSLFVDPLFFYLPLVRDEVCIDIGTALEVFLTIIRSMADVFYMIQILMKFRTAYVAPSSRVFGRGELVIDTTKIATRYLRKDFGLDFIAALPLPQVLIWIVIPNLGGSTMANTKNVLRFIIIFQYLPRLFLIFPLSSQIVKATGVVTETAWAGAAYNLVLYMLASHFLGASWYLLSIERQEACWRSVCDMEPSCQYGFFDCKRVEDSFRVSWFIASNITVLCSPKANFYQFGIYGDAVTSQVTTSSFFHKYFFCLWWGLRNLSSLGQGLLTSTFVGEIMFAIVVATLGLVLFALLIGNMQTYLQSTTVRLEEWRVRRTDTEQWMHHRQLPPELRQSVRKYNQYKWLATRGVDEEALLKGLPADLRRDIKRHLCLELVRRVPLFDQMDERMLDAICERLKPALCTENTYLVREGDPVNETLFIIRGHLDSYTTNGGRSGFFNSCRIGPGDFCGEELLTWALGPRPSFILPSSTRTVKAISEVEAFALIAEDLKFVASQFRRLHSKQLRHKFRFYSHQWRTWAACFIQAAWRRYKKRKEVAELRALSYVESMSEGETVGLVVYGTRMTRKSTVHSDGVVKSLQKPEEPDFSVGE* 737
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00440 736 SMART cnmp_10 526 657 IPR000595 -
Lapu11g00440 736 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 116 732 - -
Lapu11g00440 736 SUPERFAMILY cAMP-binding domain-like 456 652 IPR018490 -
Lapu11g00440 736 Gene3D - 1 81 IPR027408 -
Lapu11g00440 736 FunFam Cyclic nucleotide-gated ion channel 1 524 642 - -
Lapu11g00440 736 SUPERFAMILY Voltage-gated potassium channels 126 448 - -
Lapu11g00440 736 PRINTS EAG/ELK/ERG potassium channel family signature 190 199 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu11g00440 736 PRINTS EAG/ELK/ERG potassium channel family signature 421 432 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu11g00440 736 PRINTS EAG/ELK/ERG potassium channel family signature 439 448 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu11g00440 736 PRINTS EAG/ELK/ERG potassium channel family signature 489 496 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu11g00440 736 PRINTS EAG/ELK/ERG potassium channel family signature 395 412 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu11g00440 736 PRINTS EAG/ELK/ERG potassium channel family signature 307 317 IPR003938 GO:0005249|GO:0006813|GO:0016020
Lapu11g00440 736 FunFam Cyclic nucleotide-gated ion channel 1 453 517 - -
Lapu11g00440 736 CDD CAP_ED 526 657 IPR000595 -
Lapu11g00440 736 Gene3D - 138 450 - -
Lapu11g00440 736 Gene3D Jelly Rolls 524 644 IPR014710 -
Lapu11g00440 736 Pfam 3' exoribonuclease family, domain 2 4 64 IPR015847 -
Lapu11g00440 736 Pfam Ion transport protein 135 453 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lapu11g00440 736 SUPERFAMILY Ribonuclease PH domain 2-like 2 78 IPR036345 -
Lapu11g00440 736 Gene3D Helix hairpin bin 453 517 - -
Lapu11g00440 736 ProSiteProfiles cAMP/cGMP binding motif profile. 526 623 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00440 Lapu-Chr11 7697006 7713064 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00440 105 733 Ion Channels AT2G28260 77.143 0.0 1012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00440 K05391 - gmx:100791992 1193.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00440 11 7697006 7713064 Lapu11g00440 11 7697006 7713064 ECH