Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00438 ATGAAGCCACAGCTCAAAATTGTTCTTGCTTTAGTTATTAGCTTGCTTTGGATTCAGCACTCATTTTGTGATGAAGCTTCTGGTGCATCTAACATAAACAAGTGGAGATGTAGATGTTCTTTTGGAGGGAATCAGAGCTACTCTCTGACTAATTGTTCTAAGTCATGTGATTGCCACTCAGATACTGAAGAGAGTGCATCCGTATGGACATGCATATGTGATTCTAATGGGTTTCCCCAAGTGGCTGCAGATGGTCATAGCCCTAATTGCTTTAACGCTTGCAACTGCACCTGGGGATCTGTCAGCAATCCTGGAGGTTCAAAGAAACATGTTTCCAGCAAGATTGTTGTAGTTATCCTATTAATATGTGTTATATGCACAACCATGGCTTTTCTTGTCTCACTCTTATGCCATGTATACAGAAAGGACAGATGTACTATTCAATCACCCATATTTTCAACAGATAAGGAAACAAGTAGTGGTAGTACCACCAACTTAATTAGTCATAGGTCAGGGGCTTCTTCGGTGCCAGAAACAAAATTTGCAATAAATTCTCCAATTTGTCATATTACAGGATGCTTTCAGAAAGCCTCTTTCTTATTTGGGAGCCCAAAAGAAACTTATCATGGAAATATTTTTCCATTTTCGTTAGCTGAACTGGAAAATGCCACTGAAAACTTTTCATCTTCCAACCTAATTGGACTAGGTGGAAGCAGTTACGTATACCATGGTCGGCTGAAAGATGGTAGTGATGTGGCTGTTAAACGGCTAAAAGATCAAGGAGGGCCAGAAGCAGACTCTGCATTTTTCAAGGAGATTGAACTATTATCTAGACTTCATCATTGTCATTTGGTGCCTTTGCTTGGATACTGTTCAGAGTTAAAAGGAAAACATGTTCAGAGGTTACTTGTATTTGACTATATGGCTAATGGAAATTTGAGGGACTGTTTAGATGGAGTTTCTGGAAAACATATAGATTGGGCTACTCGTGTTATGATTGCGTTAGGAGCTGCAAGGGGGTTGGAGTATCTCCATGAAGCAGCTGCTCCAAGAATTCTTCATAGAGATGTCAAATCAACTAACATTCTTCTGGATGAAAATTGGCAAGCAAAAATAACTGATCTTGGCATGGCTAAAAACCTGAGATCTGATGACCTCCCTAGCTGTTCAAATTCTCCTGCAAGAATGCAGGGTACATTTGGCTATTTTGCACCTGAGTATGCCATTGTTGGTAGAGCTTCTCTTGAGTCAGATGTCTTTAGTTTTGGTGTGGTTCTTCTCGAGCTTATCAGTGGTCGGCAGCCCATCCATAAATCTACTGGCAAAGAAGAAAGCCTTGTTATATGGGCTACTCCTCGCTTACAGGATAGTAGGCGAGTAATAACGGAGCTGGTTGATCCACAAATAAAAGGAAATTTCCCAGAAGAAGAGGTGCAGGTGATGGCATACTTAGCAAAGGAGTGTTTGCTGCTGGATCCTGACACTCGACCTACCATGAGTGAAGTTGTTCAAATTCTTTTAAGTATTTCCCCTGGAAAATCTAGGAGGCGAAGAAACATTCCAGGCAGCCTCTTTCAGGAACCTCAGTATGAAGAAAAGCAAAGGCAAGCTACACCCAGTAAATTTCCAACGCAAAGTTCACTGCCAATATGTATTGATCATAATCTTTCTGTTGAGAACAAAAGTAAAGAAGCAGATCCAGTTTCAACTGAGTATATGGAGAGTTTGATACTGTTGTCTGCAAAATCTGATGACTCTTGCGCATCAGAAGAGGAAATGGTAGACCTAACTGAGCCTAGGTTTGAAACGTTTTGCATCACGACTGGCAAAGCCCCTTGA 1839 0.4095 MKPQLKIVLALVISLLWIQHSFCDEASGASNINKWRCRCSFGGNQSYSLTNCSKSCDCHSDTEESASVWTCICDSNGFPQVAADGHSPNCFNACNCTWGSVSNPGGSKKHVSSKIVVVILLICVICTTMAFLVSLLCHVYRKDRCTIQSPIFSTDKETSSGSTTNLISHRSGASSVPETKFAINSPICHITGCFQKASFLFGSPKETYHGNIFPFSLAELENATENFSSSNLIGLGGSSYVYHGRLKDGSDVAVKRLKDQGGPEADSAFFKEIELLSRLHHCHLVPLLGYCSELKGKHVQRLLVFDYMANGNLRDCLDGVSGKHIDWATRVMIALGAARGLEYLHEAAAPRILHRDVKSTNILLDENWQAKITDLGMAKNLRSDDLPSCSNSPARMQGTFGYFAPEYAIVGRASLESDVFSFGVVLLELISGRQPIHKSTGKEESLVIWATPRLQDSRRVITELVDPQIKGNFPEEEVQVMAYLAKECLLLDPDTRPTMSEVVQILLSISPGKSRRRRNIPGSLFQEPQYEEKQRQATPSKFPTQSSLPICIDHNLSVENKSKEADPVSTEYMESLILLSAKSDDSCASEEEMVDLTEPRFETFCITTGKAP* 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00438 612 SUPERFAMILY Protein kinase-like (PK-like) 207 506 IPR011009 -
Lapu11g00438 612 PANTHER OS01G0750732 PROTEIN 62 522 - -
Lapu11g00438 612 FunFam receptor-like serine/threonine-protein kinase NCRK 201 307 - -
Lapu11g00438 612 MobiDBLite consensus disorder prediction 529 544 - -
Lapu11g00438 612 ProSitePatterns Protein kinases ATP-binding region signature. 233 255 IPR017441 GO:0005524
Lapu11g00438 612 FunFam receptor-like serine/threonine-protein kinase NCRK 308 518 - -
Lapu11g00438 612 Gene3D Phosphorylase Kinase; domain 1 202 307 - -
Lapu11g00438 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 352 364 IPR008271 GO:0004672|GO:0006468
Lapu11g00438 612 SMART serkin_6 227 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00438 612 CDD STKc_IRAK 233 509 - -
Lapu11g00438 612 ProSiteProfiles Protein kinase domain profile. 227 507 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00438 612 MobiDBLite consensus disorder prediction 513 544 - -
Lapu11g00438 612 Gene3D Transferase(Phosphotransferase) domain 1 308 521 - -
Lapu11g00438 612 Pfam Protein kinase domain 229 504 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00438 Lapu-Chr11 7680306 7686898 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00438 1 606 Receptor kinase-like Gene Family AT2G28250 51.064 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Lapu11g00438 Pkinase 1.2e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00438 - - gmx:100817870 1118.22