Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00383 ATGAATGAAATCTCGTACTCCGACAAGTATTTCGATGATACTTATGAATATAGACATGTGATTCTGCCTCCTGAAATCGCCAAGCTTCTTCCCAAAAATCGACTTCTATCTGAAAAAGAGTATAGAGCGATTGGGGTTCGGCAGAGCCGTGGTTGGGTTCATTACGCAATTCATCGACCTGAGCCACAAATACTCCTTTTCAGGAGGCCTTTGAATTATCAGGCCCAGCAGCAGAAAGATATTTGA 246 0.4268 MNEISYSDKYFDDTYEYRHVILPPEIAKLLPKNRLLSEKEYRAIGVRQSRGWVHYAIHRPEPQILLFRRPLNYQAQQQKDI* 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00383 81 PRINTS Cyclin-dependent kinase regulatory subunit signature 40 54 IPR000789 GO:0016538
Lapu11g00383 81 PRINTS Cyclin-dependent kinase regulatory subunit signature 55 69 IPR000789 GO:0016538
Lapu11g00383 81 PRINTS Cyclin-dependent kinase regulatory subunit signature 3 17 IPR000789 GO:0016538
Lapu11g00383 81 PRINTS Cyclin-dependent kinase regulatory subunit signature 18 32 IPR000789 GO:0016538
Lapu11g00383 81 SUPERFAMILY Cell cycle regulatory proteins 2 77 IPR036858 GO:0016538
Lapu11g00383 81 PANTHER CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 2 79 - -
Lapu11g00383 81 FunFam Cyclin-dependent kinases regulatory subunit 1 81 - -
Lapu11g00383 81 Pfam Cyclin-dependent kinase regulatory subunit 4 70 IPR000789 GO:0016538
Lapu11g00383 81 SMART CKS_2 3 72 IPR000789 GO:0016538
Lapu11g00383 81 ProSitePatterns Cyclin-dependent kinases regulatory subunits signature 1. 6 24 IPR000789 GO:0016538
Lapu11g00383 81 Gene3D - 1 81 IPR036858 GO:0016538
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00383 Lapu-Chr11 6922594 6923624 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00383 1 81 Core Cell Cycle Gene Families AT2G27970 79.012 3.71e-47 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00383 K02219 - gmx:100789531 148.288