Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00362 ATGGACTTTGAGAATAACGAATCTCCTCCTTCACCAAACCCTAATCCACTGTGTGATTCTCCAAATCCACAACCCAACAATGCTAATCCTTCTCACAAGAGGAAAGCGGGTAGAAAGAAGTTTAGGGAGACACGGCACCCTGTGTATAGGGGTGTACGCCAAAGAAACGGCAACAGATGGGTCTGTGAAATCAGAGAACCGACAAAAAAATCAAGGATTTGGGTAGGCACATACCCTACTCCTGAAATGGCTGCTAGGGCACATGATGTGGCTGTCTTAGCACTTAATGGCACTTCTGCAAAGTTCAATTTTCCGGATTCAGTTTCCCTTCTCCCCACTGCAAAGTCTCCTTCTGCTGTAGATATAAGGGAAGCAGCAAAAGCTGCTACTGTTGATCAGGCCTTCATACCAAACACTTCTTTTTCTTCTTCCTCTCATGGCAATTCTACTTTTGAAGAAAATGGGAATGCTGAAGACACTTGTTTGAACATGAGCATGCACAATGATGAGTCTGAAACCTTGTTCTTTGATGAGGAGGCTCTGTATAATATGCCAGGTTTGTTGGATAGTATGGCAGAGGGTTTGCTAATTACACCACCCTCTACCGAAAGAGCACTCGACTGGGACCATATTGGTTCTGAAATAGACCTTACTCTCTGGAATAACTAA 669 0.4395 MDFENNESPPSPNPNPLCDSPNPQPNNANPSHKRKAGRKKFRETRHPVYRGVRQRNGNRWVCEIREPTKKSRIWVGTYPTPEMAARAHDVAVLALNGTSAKFNFPDSVSLLPTAKSPSAVDIREAAKAATVDQAFIPNTSFSSSSHGNSTFEENGNAEDTCLNMSMHNDESETLFFDEEALYNMPGLLDSMAEGLLITPPSTERALDWDHIGSEIDLTLWNN* 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00362 222 MobiDBLite consensus disorder prediction 1 47 - -
Lapu11g00362 222 MobiDBLite consensus disorder prediction 9 23 - -
Lapu11g00362 222 PRINTS Ethylene responsive element binding protein signature 49 60 IPR001471 GO:0003700|GO:0006355
Lapu11g00362 222 PRINTS Ethylene responsive element binding protein signature 71 87 IPR001471 GO:0003700|GO:0006355
Lapu11g00362 222 Pfam AP2 domain 47 97 IPR001471 GO:0003700|GO:0006355
Lapu11g00362 222 Gene3D AP2/ERF domain 48 106 IPR036955 GO:0003700|GO:0006355
Lapu11g00362 222 FunFam Ethylene-responsive transcription factor 2 47 106 - -
Lapu11g00362 222 CDD AP2 49 107 IPR001471 GO:0003700|GO:0006355
Lapu11g00362 222 SUPERFAMILY DNA-binding domain 48 107 IPR016177 GO:0003677
Lapu11g00362 222 SMART rav1_2 48 111 IPR001471 GO:0003700|GO:0006355
Lapu11g00362 222 MobiDBLite consensus disorder prediction 32 46 - -
Lapu11g00362 222 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 26 221 IPR045277 GO:0003700
Lapu11g00362 222 ProSiteProfiles AP2/ERF domain profile. 48 105 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00362 Lapu-Chr11 6672976 6673644 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00362 15 221 AP2-EREBP Transcription Factor Family AT4G25470 43.750 3.11e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lapu11g00362 AP2 1e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00362 - - gmx:100793751 358.992