Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00352 ATGGACACAGAGGATCTAACTGATGACCTTCACAGTCTCAGCTTCGCTTCCACCACCACCACCAAACGCAGCACAAGTTTCAGCTCCGAAACTACCACCGTCACGCCCTCCACCTCCTCCCACTTCCTTCACCCGCCACTCCCCAACGCCAAGCCTCACGCGCTCTCCTCCGACCCCTGCGCCTCTTTCATCCAACGTACGCGGCCCCTAGCCCTCTCCCACCTCCGATTCACGCGCCGCCTCGGCTCCGGCGACATGAGTGCCGTCTATTTGGCGGAGCCCACGGAAGAAGGCGGCGGCGCGGTGTTCGCGGCGAAGGTGATGGAGAAGGAGGACTTGGCGAGGAGGAACAAGGAAGGGAGAGCGAGGACAGAAAGGGAAATTCTGGAAATGTTGGATCACCCGTTCTTGCCCACGCTCTACGCGTCCATCCACGCGCCCAAATGGCTCTGCTTCCTCACCCCGTTCTGCCCCGGCGGTGACTTGCACGTCCTCCGACAGCGCTTCCCCAACAAACGCTTCCTCGAATCCGCCGTCAGGTTCTACGCATCGGAAGTGTTGTTGGCACTTGAATATCTCCACATGTTGGGGATAATCTACCGCGACTTGAAGCCCGAAAACGTGTTGATAAGATCAGACGGCCACATCATGCTCACCGACTTCGACCTGTCATTAAAATGCGATGATTCCACATCAACGGCTCAGATCATCTCCGACCAAAACCCCCTTCCCACGCGCAACGATTGCCACGTGGACGCCGCACGCGTGGCCTCCTCCTCGTGCATAATCCCGAGCTGCATAGTCCCCACGGCGTCGTGTTTCCAGCCAAAACGCAAGCGGAAGAAGAAGCAGAAGCTGCGTAGCGGGCCTGCGTTCGTGGCGGAACCCATCAACGTTCGGTCGATGTCATTCGTGGGGACCCACGAGTACTTGGCGCCGGAGATCGTGTCCGGGGAGGGCCACGGCAGTGCGGTGGACTGGTGGACTTTGGGGATATTTATGTTCGAACTGTTCTACGGCGTGACACCCTTCAAGGGGATGGACCACGAGCTAACCCTGGCCAACATTGTTGCTCGAGCCCTTGAGTTCCCGAAGGAACCGGCGTGTTCAGGGGCCATGAAGGACCTTATATCGCAGTTGCTGGTTAAGGACCCGGGGAAGAGGCTAGGGTCGCTCATGGGAGCCTCTGCGATAAAGCAACACTCTTTTTTTGACGGCGTTAATTGGGCGTTGCTTAGGTGTGCAACACCACCCTTTCTTCCTCCACCTAATACTAATACCAAAGCTGTATATGATGATGATCATCAATGTTCCCCTGACATTTTCGTTGATTCTTATTAA 1341 0.5675 MDTEDLTDDLHSLSFASTTTTKRSTSFSSETTTVTPSTSSHFLHPPLPNAKPHALSSDPCASFIQRTRPLALSHLRFTRRLGSGDMSAVYLAEPTEEGGGAVFAAKVMEKEDLARRNKEGRARTEREILEMLDHPFLPTLYASIHAPKWLCFLTPFCPGGDLHVLRQRFPNKRFLESAVRFYASEVLLALEYLHMLGIIYRDLKPENVLIRSDGHIMLTDFDLSLKCDDSTSTAQIISDQNPLPTRNDCHVDAARVASSSCIIPSCIVPTASCFQPKRKRKKKQKLRSGPAFVAEPINVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGIFMFELFYGVTPFKGMDHELTLANIVARALEFPKEPACSGAMKDLISQLLVKDPGKRLGSLMGASAIKQHSFFDGVNWALLRCATPPFLPPPNTNTKAVYDDDHQCSPDIFVDSY* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00352 446 SUPERFAMILY Protein kinase-like (PK-like) 55 429 IPR011009 -
Lapu11g00352 446 Gene3D Transferase(Phosphotransferase) domain 1 300 422 - -
Lapu11g00352 446 Gene3D Transferase(Phosphotransferase) domain 1 161 236 - -
Lapu11g00352 446 SMART serkin_6 75 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00352 446 FunFam serine/threonine-protein kinase D6PK-like 299 422 - -
Lapu11g00352 446 Pfam Protein kinase domain 301 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00352 446 Pfam Protein kinase domain 78 235 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00352 446 Gene3D Phosphorylase Kinase; domain 1 75 160 - -
Lapu11g00352 446 MobiDBLite consensus disorder prediction 21 51 - -
Lapu11g00352 446 MobiDBLite consensus disorder prediction 21 44 - -
Lapu11g00352 446 PANTHER FLIPPASE KINASE 1-RELATED 21 426 - -
Lapu11g00352 446 FunFam serine/threonine-protein kinase D6PK-like 161 228 - -
Lapu11g00352 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 198 210 IPR008271 GO:0004672|GO:0006468
Lapu11g00352 446 ProSiteProfiles Protein kinase domain profile. 75 404 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00352 446 ProSitePatterns Protein kinases ATP-binding region signature. 81 106 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00352 Lapu-Chr11 6594218 6597682 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00352 4 414 AGC Kinase Gene Family AT3G44610 62.413 0.0 513
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Lapu11g00352 Pkinase 1.1e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00352 K08286 - gmx:100811470 677.552