Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00348 ATGAGCGGCGATGGTCGGAGACGTGACCGGAGAGACACCAGAGCACCGAAGAAGCGGCGGCTGAACCGCAACCCCGAGGATGAGCTCGAAGCTAAATTAGGGTTCGATCTCTTCTCAGAGGGCGAAAAGCGGCTCGGATGGCTACTCACTCTTGCATCCTCATCTGTTGAGGATGAAAACAGCTACAAAGTATACAGTTGTGTCGATCTTTACTTTGTTGCACAGGATGGCTCTTCATTCAAGTCAAAGTTCAGATTTCGGCCTTACTTCTATATAGCTACAAAGGATAAAATGGAGATGGATGTTGAAGCATACCTGAGAAGACGTTATGAAGGTCAGATTGGTGATATTGAAATTATAGAGAAAGAAGACCTGGATCTTAAAAACCATTTATCCGGGTTAAGAAAATCTTATTTAAAGCTTTCATTTGATACTGTGCAACAATTGATGGATGCTAAAAAAGACCTGATGCCTTCTGTTGAAAGAAACAAGGCCAAGTCTGATACCGCAGAAGCCTTTGAGTCCATGTCAACAGAAAGAAGAGAACATAAACCCCAGGATTTTCTAGATTGCTTGACTGATCTTCGAGAATATGATGTTCCTTATCATGTTCGCTTTGCCATTGACAACGATATACGGTGTGGCCAGTGGTATGATGTTGGAGTGTCCAATAATGGGGTTACACTTGAGAAGAGGACAGATCTTCTGCAGCGTGCTGAAGTTCGTGTTTGTGCATTTGACATTGAGACCACGAAACTTCCATTAAAGTTTCCTGATGCTGACTATGATTTAGTTATGATGATTTCATACATGGTAGATGGTCAAGGGTATTTAATCATAAATAGAGAGTGTGTCGGGGATGATATAGAGGATATAGAGTACACTCCAAAACCAGAGTTTGAAGGGTGTTTTAAAGTGACAAATGTTCAAAATGAGATTGAGCTTCTTAGATTGTGGTTTTCTCATATGAAAGAGGTGAAACCTGGTATCTACGTGACATATAATGGTGATTTTTTTGATTGGCCATTCCTGGAACGAAGGGCAACCCATCTTGGGTTCAAAATGAGTGATGAATTGGGGTTCAAATGCGACACAAATCAAGGGGAATGTCGTGCTAGATATGCTTGCCATTTGGATTGTTTTGCTTGGGTTAAACGTGATAGTTATCTCCCCCAGGGGAGTCAAGGCCTAAAGGCTGTTACAAAAGCAAAGTTGGGTTATGATCCATTGGAGGTGAATCCTGAAGACATGGTTCGATTTGCAAAGGAAAAGCCGCAGATGATGGCCTCCTATTCTGTTTCAGATGCAGTGGCAACTTATTACTTATATACAACTTATGTTCATCCCTTTATTTTCTCTCTTGCAACCATTATACCTATGCCACCAGATGAGGTTTTGCGCAAAGGTAGTGGAACCCTCTGTGAAATGTTGCTTATGGTGCAGGCATACAAGGCTAATGTTATATGTCCTAACAAACACCAATCTGATCCAGAGAAGTTTTATAATAATCATCTTCTTGAGAGCGAGACATACATTGGTGGTCATGTGGAATGTCTTGAAAGTGGTGTATTCAGATCTGATATCCCATCTAATTTTACACTAGAGCCATCTGCTTATCAGCAACTGATTAGCAATCTTGATCGAGATCTACAATATGCTATAACAGTGGAGGGTAAGATGGATTTGGAATCTGTTTCTAATTATGATGAAGTAAAGAATGCAATCATGGAAAAGCTTGTAAAATTACGAGATGTGCCAATACGTGATGAATGTCCCCTCATTTATCATCTGGATGTTGCTGCTATGTATCCAAACATAATTTTAACAAACCGACTTCAGCCACCATCAATTGTCACAGATGAAGTCTGCACTGCATGTGATTTTAATCGTCCTGGAAAGACTTGCCTACGTAAGCTTGAGTGGGTTTGGCGTGGAGAAACATTCATGGCAAAGAAAAGTGACTACTATGCTTTAAAGACACAGATTGAATCAGAGTTTGTTGATGATTCTGAGAACAACAAATCCTTATCCCGTTATTCTGAGAACAACAAATCCTTATCCCGCTATTCTGAGAAGAGGTCATCAAAATCTTTTCTTGATCTTCCCAAGTCAGAGCAACAATCAAGGCTGAAAGATCGTTTAAAGAAATACTGCCAGAAGGCATATAAGCGAGTACTCGACAAACCTGTTACTGAGGTTCGTGAAGCGGGAATCTGCATGCGTGAAAATCCATTTTATGTTGACACTGTTCGCAGTTTCCGAGATAGAAGATACGAGTATAAAGGTCTCAATAAGGTTTGGAAGGGAAAGCTGTCAGAGGCCAAGGCTAGTGGAAATTCTATGAAGATTCAAGAAGCACAGGATATGGTTGTGCTTTATGATTCGTTGCAACTTGCTCACAAGTGTATACTTAATTCCTTTTATGGATATGTCATGCGCAAGGGTGCAAGATGGTACTCCATGGAAATGGCTGGAGTAGTGACTTATACTGGTGCAAAAATAATTCAGAATGCCCGCTTGCTAGTAGAAAAAATAGGAAAACCACTTGAACTAGACACGGACGGTATTTGGTGTGCACTTCCGGGATCTTTCCCAGAAAATTTCACTTTTAAAACGAAAGACCCAAAGAAGAAGTTTACAATATCGTATCCTTGTGTTATGCTTAATGTTGATGTGGCAATAAATAATACAAATGATCAATATCAGACACTCACAGATCCAATCAGGAAAACTTATACAACTCATAGTGAATGCTCTATTGAATTTGAGGTGGATGGACCATACAAGGCAATGATCCTTCCCGCTTCCAAGGAAGAAGGAATTCTAATTAAGAAGCGATATGCTGTTTTTAATGATGATGGAACCCTTGCAGAGCTGAAAGGTTTTGAGATCAAGCGCAGAGGTGAATTGAAGTTAATCAAAGTTTTCCAGGCTGAACTTTTTGACAAGTTTCTCCATGGTTCAACATTAGAAGAATGCTATTCAGCAGTTGCTTCAGTGGCAAACCGCTGGCTCGATCTTCTTGATAACCAGGGAAAGGATATCGCAGACAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAATCTTTAGCTGATTATGGTGAGCAGAAGTCTTGTGCTGTTACCACTGCTAGACGTCTAGCTGACTTTCTTGGAGATACAATGGTCAAAGATAAAGGTCTTCGATGTCAATACATAGTTGCAAGTGAACCAAAGGGCACACCAGTTAGTGAGCGTGCTATTCCTGTGGCAATATTTGAAACTGATGCTGAGGTAATGAAGTTCTATGTCCGAAAATGGTGCAAGGTCTCATCTGAAGTTGCCATTCGTTCGATAATTGATTGGTCCTATTACAAGCAGCGGCTTAGTTCTGCAATTCAAAAAATTGTCACTATTCCTGCTGCAATGCAAAAGGTTTCAAATCCTGTCCCTAGGGTAGTTCATCCTGATTGGTTGCATAAGAAGGTTCGTGAGAAGGAGGACAAGTTTCGCCAACGAAAACTAGTTGATGTATTCAAATCAATGAGCAGGAATGAGCACTCAAAAAAGCATAATGACTCAAATGGTGTCCCTATTGTGATGGATGACGAGATTCTTAATGAGTTAGAGGACTTTGGAAACAAGGGTAGGAGTTCCACATATGGACCTAGACCAATTATTCGACATTATCAAGCTAATAATGAACAACATTCTAGGAAGATCAGTGATCCACAAGATTTGGAGCAAGAGCATAATAAAGATAATGGCAGCAAGGAAGATCTGCTTTCACCATTACAACAAAATGAAACGTGTGAAAATGTAGACAAAAGTGTAGATTATCAAGGATGGCTTCAAGTAAAGAAGCGAAAGTGGAAGAGTATCCTGGAAGGAAGAAAGAAGCAAAGACTGGAGAATTCAAAGACATCTAATCGTGTAAATGGTGTTTCTGAACAAAGAAATGGTAAAAGGAATCAAGCCAAAAGTCATGTTAGTTCATATCTTAAAAGGCTTGAGGTAGACTTAACGAAGTGTCATTGGCAGATAATACAACTAGTTCCCAGTTCACCAATAGGCCAGTTTTTTGCTTGGGTTGTTGTTGATGGGAGTATGCACAAGATTCCTGTTTCTGTTCCTAGAGTCTTTTACCTCAATTCAAGATCCCCAATTATAGAAGAATTTATGGGTAAACGTGTTAACAAGACTCTTCCTCACGGAAGGCACAGTTATAACTTATACGAGGTCTCAATTAATGAAATTCAATATGGGGAAGTAAGCAAAAAACTTGCAACTCTTCTAGCAGATCCTGATGTTGAGGGAATATATGAAACTAAGATGCCACTGGAGTTTAGTGCAATAGTCCAGCTTGGTTGTGTATGTAAGGTAGACAAAAATGCTAACAAACGTAGTCTACAAGAACCATGGAATTTGAGTGAATTGCACATGAAGACTACGACAGAATGTGTTTATCTTGAACAATCTCTATCCTTCTTTTATTTGTACCACAGCATCTCTGAGGGGCGGGCTATATATGTTGGATATTTTCCTGCATCAAAAGCAATAACTGTTGTGGTGGTTAATCCCTATCAAAACAAAGATTTATCACTGACTTTTCTTGAAAGACAATTTCATGATGCTTGCCAGGCTTTGTCTATTGAGCCACTTCCGAGGAGTGACATTAATTTTAAGGTGGACTATGTTTCACATTTCAAGGATGCTGAAACAGTGATGCAAAGAACAATAAATGGTCACAGTCACGGGAGGGAAAATCATGTGCCAATGGTTGCTGTCATTGAATGCCCAAATGTTCAATTAGTGAAATTGGGCATCCGTGCTCTGGATGATTTTCCGTGCCTGAGTGTTCCTTATAACGCACGTGACAGTCAGTACCAGATTCTTGGATGGCAACAAACGGCTGCAAAAGTTGGAATGCAACGTTGTGCTGCATCAGTTCAATGGTTAAATAAAAGAATTGCTCTCTCAAGATATGCCCATGTACCGCTGGGGAACTTTGAACTTGACTGGCTTATATTTGTGGCTGATATCTTCTTTTCAAGAGCTTTGCATGATAATCAACAGGTGCTTTGGATATCTGATGACGGTCTTCCAGATTTAGGTGGGATTAATGGTGAACAGAACTGTTTTGTTGACGAGGTCCAACAACCTGTTTTTATACGTTCTGGAGCTTATCGAAACGTAACTGTGGAGTTAAAGATACACCACCTGGCTATAAATGCACTACTCAAATACAGCCTAGTTAATGAAATGGAAGGAGGCACTCTACTAGGATTTGGTCATGAACATGATTCTGGAGCATTTTCCATGAATGATCAGAATGGTTTTGATGAGTCTACCTCGTGTGCACAAGCCTTTCGAGTCCTTAAGCAGTTAATCCAGCGGTGCCTAGCAGATGCAGTGACATCAGGAAATGTTTATGCTGATTCAATCTTACAGCATCTATATAGATGGCTTTGCAGCCCTAAATCAAAACTTCATGATCCAGCTCTCCACCAGCTACTCCACAAGGTCATGCAAAAGGTCTATGCGTTATTGTTGGCAGAGTTCCGCAAGTTAGGTGCTACAATTGTATTTGCAAACTTCACGAAGATTATTATAGACACGGGGAAATATGATCTGTCTAGAGCCAAAGCTTACTGCGAAAGTTTGTTAAGAACTATACAATCTAGAGATCTATTTGAATGGATTGAGCTTGAACCACTGCAATTCTGGTGCTCGTTACTGTTCATGGATCAGTATAACTACGGTGGAATACCAGCAAAATCTGATGAAGCCATGAATGGTAAATCCCAAGTAGACATTATATCGAGCTGGAATATTGCTGAATACTTGCCAAAAAAAGTCCAAGACCATTTTGTTTTCATCGTTTCTCAATTCATGTATATTCCCTGGAATTACGCACAAAACCAAGCACAAATCAGGGCCTCGTTGCAGGATGGTGACACTTGTACTCCATCAATAAGCATTGGAGCTGCAGCGGCTTTTGAATCAGAAATAACAGAATATATCAAAGAACAGATTAGCTCTTACTTCGCAGACAAACTGCTAGGAATTGTTCACGACATTGGTCTTCATATGAAGGGGCTGCGCAGATCAGAAAACAACCAGAGCATGTCATCAGACCCTGAAGTACATAGAGGGGATGCTGCCTTGGAATTTATCAAGCATGTCTGTGCTGTCCTGGCCCTTGACCAAAGTGTGCAGCATGAAGTTGTGCTCTTGAAAAGGAATTTGCTCAAATATGTTAATGTCAGGGAGTTTGCTCCAGAAGCCGAGTTTCATAGTCCTTCTGATTCCTTCATCTTATCCAATGTCATATGCAGCTATTGTAATGACTGCAGAGACTTGGACTTGTGCCGGGATTCGAATTCATTAACTGAGGAGTGGCGTTGTGCAGTGCCACAGTGTGGCCAGCCTTATGACCGTGAGGTGATGGAAAATGCTCTTCTTCAGATTGTAAGACAAAGAGAACGACTATACCACCTGCAAGATCTGGTGTGTATCAGGTGCCATCAGGTGAAAGCTGCACATTTGGCAGAACAATGTGCATGTGGAGGCTCGTTTAGGTGCAAGGAAGATGCAAATGAATTTCGTAGAAAGATGATGGTTTTCTTTAACATAGCATCTCGTCAGAAATTCCAGCTTCTCCAAGAATGTACCTCTTGGATTTTAGAACTTAGATAG 6690 0.4052 MSGDGRRRDRRDTRAPKKRRLNRNPEDELEAKLGFDLFSEGEKRLGWLLTLASSSVEDENSYKVYSCVDLYFVAQDGSSFKSKFRFRPYFYIATKDKMEMDVEAYLRRRYEGQIGDIEIIEKEDLDLKNHLSGLRKSYLKLSFDTVQQLMDAKKDLMPSVERNKAKSDTAEAFESMSTERREHKPQDFLDCLTDLREYDVPYHVRFAIDNDIRCGQWYDVGVSNNGVTLEKRTDLLQRAEVRVCAFDIETTKLPLKFPDADYDLVMMISYMVDGQGYLIINRECVGDDIEDIEYTPKPEFEGCFKVTNVQNEIELLRLWFSHMKEVKPGIYVTYNGDFFDWPFLERRATHLGFKMSDELGFKCDTNQGECRARYACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMPPDEVLRKGSGTLCEMLLMVQAYKANVICPNKHQSDPEKFYNNHLLESETYIGGHVECLESGVFRSDIPSNFTLEPSAYQQLISNLDRDLQYAITVEGKMDLESVSNYDEVKNAIMEKLVKLRDVPIRDECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYYALKTQIESEFVDDSENNKSLSRYSENNKSLSRYSEKRSSKSFLDLPKSEQQSRLKDRLKKYCQKAYKRVLDKPVTEVREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKDPKKKFTISYPCVMLNVDVAINNTNDQYQTLTDPIRKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTLEECYSAVASVANRWLDLLDNQGKDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLADFLGDTMVKDKGLRCQYIVASEPKGTPVSERAIPVAIFETDAEVMKFYVRKWCKVSSEVAIRSIIDWSYYKQRLSSAIQKIVTIPAAMQKVSNPVPRVVHPDWLHKKVREKEDKFRQRKLVDVFKSMSRNEHSKKHNDSNGVPIVMDDEILNELEDFGNKGRSSTYGPRPIIRHYQANNEQHSRKISDPQDLEQEHNKDNGSKEDLLSPLQQNETCENVDKSVDYQGWLQVKKRKWKSILEGRKKQRLENSKTSNRVNGVSEQRNGKRNQAKSHVSSYLKRLEVDLTKCHWQIIQLVPSSPIGQFFAWVVVDGSMHKIPVSVPRVFYLNSRSPIIEEFMGKRVNKTLPHGRHSYNLYEVSINEIQYGEVSKKLATLLADPDVEGIYETKMPLEFSAIVQLGCVCKVDKNANKRSLQEPWNLSELHMKTTTECVYLEQSLSFFYLYHSISEGRAIYVGYFPASKAITVVVVNPYQNKDLSLTFLERQFHDACQALSIEPLPRSDINFKVDYVSHFKDAETVMQRTINGHSHGRENHVPMVAVIECPNVQLVKLGIRALDDFPCLSVPYNARDSQYQILGWQQTAAKVGMQRCAASVQWLNKRIALSRYAHVPLGNFELDWLIFVADIFFSRALHDNQQVLWISDDGLPDLGGINGEQNCFVDEVQQPVFIRSGAYRNVTVELKIHHLAINALLKYSLVNEMEGGTLLGFGHEHDSGAFSMNDQNGFDESTSCAQAFRVLKQLIQRCLADAVTSGNVYADSILQHLYRWLCSPKSKLHDPALHQLLHKVMQKVYALLLAEFRKLGATIVFANFTKIIIDTGKYDLSRAKAYCESLLRTIQSRDLFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDEAMNGKSQVDIISSWNIAEYLPKKVQDHFVFIVSQFMYIPWNYAQNQAQIRASLQDGDTCTPSISIGAAAAFESEITEYIKEQISSYFADKLLGIVHDIGLHMKGLRRSENNQSMSSDPEVHRGDAALEFIKHVCAVLALDQSVQHEVVLLKRNLLKYVNVREFAPEAEFHSPSDSFILSNVICSYCNDCRDLDLCRDSNSLTEEWRCAVPQCGQPYDREVMENALLQIVRQRERLYHLQDLVCIRCHQVKAAHLAEQCACGGSFRCKEDANEFRRKMMVFFNIASRQKFQLLQECTSWILELR* 2230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00348 2229 MobiDBLite consensus disorder prediction 1230 1255 - -
Lapu11g00348 2229 MobiDBLite consensus disorder prediction 1297 1326 - -
Lapu11g00348 2229 Pfam DNA polymerase family B, exonuclease domain 74 400 IPR006133 -
Lapu11g00348 2229 Gene3D - 961 1145 IPR042087 -
Lapu11g00348 2229 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 17 2227 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Lapu11g00348 2229 FunFam DNA polymerase epsilon catalytic subunit 961 1145 - -
Lapu11g00348 2229 MobiDBLite consensus disorder prediction 1304 1326 - -
Lapu11g00348 2229 Gene3D Palm domain of DNA polymerase 774 957 IPR023211 -
Lapu11g00348 2229 FunFam DNA polymerase epsilon catalytic subunit 56 227 - -
Lapu11g00348 2229 SUPERFAMILY DNA/RNA polymerases 469 1161 IPR043502 -
Lapu11g00348 2229 SUPERFAMILY Ribonuclease H-like 65 490 IPR012337 -
Lapu11g00348 2229 Pfam Domain of unknown function (DUF1744) 1552 1920 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Lapu11g00348 2229 Gene3D - 238 468 IPR036397 GO:0003676
Lapu11g00348 2229 SMART polmehr3 239 862 IPR006172 GO:0000166|GO:0003676|GO:0003887
Lapu11g00348 2229 FunFam DNA polymerase epsilon catalytic subunit 240 468 - -
Lapu11g00348 2229 CDD DNA_polB_epsilon_exo 240 443 - -
Lapu11g00348 2229 Gene3D DNA Polymerase, chain B, domain 1 49 228 - -
Lapu11g00348 2229 CDD POLBc_epsilon 503 1142 - -
Lapu11g00348 2229 MobiDBLite consensus disorder prediction 1 25 - -
Lapu11g00348 2229 FunFam DNA polymerase epsilon catalytic subunit 772 957 - -
Lapu11g00348 2229 MobiDBLite consensus disorder prediction 1230 1264 - -
Lapu11g00348 2229 SMART DUF1744_2 1534 1920 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Lapu11g00348 2229 Pfam DNA polymerase family B 773 1090 IPR006134 GO:0000166|GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00348 5 2226 Core DNA Replication Machinery Family AT2G27120 65.993 0.0 2996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00348 K02324 - gmx:100812003 4069.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00348 11 6541935 6574109 Lapu11g00348 11 6541935 6574109 ECH