Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00334 ATGTCTTGCCCCCACATAACTGCAGTTGCAGCAGTTATAAAATCTCACCATCCACATTGGGGTCCTGCAGCCATAAAGTCTGCAATAATGACAACAGCCACAGTTATGGATAACACACATCACCTCATAGGAAGAGATCCAAATGGAACTCAAACCACACCATTTGACTACGGATCTGGACATGTTAACCCTGTTGCATCACTCAATCCGGGATTAGTATATGAATTTAATTCCCAAGATGTTCTCAGTTTTTTGTGCAGCAATGGAGCAAGCCCAGAACAACTTAAAAACCTTACTGGGGATCTTACTCAGTGTCAAAAACCTCTTACAGCTTCCTACAACTTCAATTATCCTTCAATTGGAGTGTCCAACTTGAATGGAAGTTTATCAGTTTATCGTACGGTTACATATTATGGTGAGGAGCCAACTGTATATTATGCAAGTGTTGATAATCCATCTGGTGTGAATGTAAGAGTTACTCCAGCAGAATTGAAGTTCCGGAAAACTGGGGACAAAATAAGTTTCAAGATTGATTTCTTCCCTTTCAAGAATAGCAGTGGAAACTTTGTGTTTGGTGCTTTGATATGGAGCAATGGCACACAAAGGGTCAGAAGTCCTATTGGTCTCAATGTACTATCTACT 642 0.4034 MSCPHITAVAAVIKSHHPHWGPAAIKSAIMTTATVMDNTHHLIGRDPNGTQTTPFDYGSGHVNPVASLNPGLVYEFNSQDVLSFLCSNGASPEQLKNLTGDLTQCQKPLTASYNFNYPSIGVSNLNGSLSVYRTVTYYGEEPTVYYASVDNPSGVNVRVTPAELKFRKTGDKISFKIDFFPFKNSSGNFVFGALIWSNGTQRVRSPIGLNVLST 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00334 214 Gene3D - 85 212 - -
Lapu11g00334 214 ProSiteProfiles Serine proteases, subtilase domain profile. 1 68 - -
Lapu11g00334 214 Gene3D Peptidase S8/S53 domain 1 80 IPR036852 GO:0004252|GO:0006508
Lapu11g00334 214 SUPERFAMILY Subtilisin-like 1 69 IPR036852 GO:0004252|GO:0006508
Lapu11g00334 214 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 207 IPR045051 -
Lapu11g00334 214 Pfam Subtilase family 1 46 IPR000209 GO:0006508|GO:0008236
Lapu11g00334 214 Pfam Fibronectin type-III domain 114 207 IPR041469 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00334 Lapu-Chr11 6355597 6365805 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00334 1 207 Subtilisin-like Serine Gene Family AT2G04160 45.455 2.35e-53 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00334 - - gmx:100792672 390.193