Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00324 ATGGCGAGCCAAAGAATAGGAGAAACGGGTCTGTCTGAGTCAGGACCTTCAAGTCACCATGTCCCTTATGGAGTTCTTCATGGGATTAATACCTCATCATCAGGCCTAATCAATCAAGGGTCTGCTTTTGATTTTGGAGAGCTTGAAGAGGCTATTGTTCTGCAAGGAATTAAGATAAGAAATGATGAAGCCAAATCATCAGCTTTATTCACAGGCAGGCCTTCAGCCACACTGGAAATGTTCCCTTCATGGCCAATGAGATTCCAGCAAACCCCAAGAGGAGGTTCAAAGTCAGGAGGGGAAAGCACTGATTCAGGATCAGGAGTGAACACTCTTTCAAGCAAAACTGAGCTCCAATTTGAAACAGAATCTCCCATAAGCATAAAAGCATCTTCTTCAGATCATCAACAGGCTTTTGATCAGCTTCAACAACAACAGGAGACAGCAACTGATGCCTCAAGGGCAGGAACATCGCAGAATCAATCAGCACCCAAATCACCTCAAGAAAAGAGGAAAGGAGCTGGTTCCACATCAGAGAAGCCACTTGATGCAAAGACACTGAGACGTTTAGCTCAAAACAGAGAAGCTGCAAGGAAAAGTCGTCTCAGGAAAAAGGCTTATGTGCAGCAACTAGAGTCAAGTAGATTAAAGCTCACACACCTTGAACAAGACCTTCAAAGAGCTCGCTCTCAGGGGGTTTTTATGGGTTGTGGTGGTGCTGGCGGAAGTATAAGTTCTGGAGCTGCAATGTTTGACATGGAGTACGCAAGATGGTTAGAAGATGACCACCGTCACATGGCGGAGCTCCGGACCGGGCTTCAGGCGCCGCTGTCAGACGGCGAGCTAAGAGTGATTGTGGATGGATATCTGTCTCATTACGATGAGGTTTTCAGGCTGAAGGGGATGGCTGCTAAAACAGATGTCTTTCATCTTATCAATGGCATGTGGACTTCACCAGCTGAGAGATGCTTCCTCTGGATAGGTGGTTTTAGACCATCAGAACTCATCACAATTTTGATACAACAGTTGGAGCCCCTAGCTGAGCAGCAAATTATGGCCATGTGTGGGCTCCGGCATTCTTCACTGCAAGCAGAAGAGGCTCTCACTCAAGGTCTTGAACAGCTTCAGCAGTCACTCGTTGATACCATCGCCGGCGGCTCCGTCGCTGACGGCGTGCAACAGATGGTGGCCGCCATGGGCAAGCTTGCCAACCTTGAAGGATTTGTTGGCCAGGCTGATAATTTGAGACAGCAAACCCTTCACCAATTATGTCGATTACTGACAGTTCGACAAGCAGCAAGATGTTTTGTTGTGATTGGAGAGTATTATGGTCGTCTAAGAGCCCTAAGTTCTCTTTGGGCATCAAGACCTCGAGAGAGCTTGATCAGTGATGATAACTCATGCCAAACAACCACGGAATTGCAGATGGTTCAACCTTCTCAGAATCACTTCTCCAATTTCTGA 1464 0.4699 MASQRIGETGLSESGPSSHHVPYGVLHGINTSSSGLINQGSAFDFGELEEAIVLQGIKIRNDEAKSSALFTGRPSATLEMFPSWPMRFQQTPRGGSKSGGESTDSGSGVNTLSSKTELQFETESPISIKASSSDHQQAFDQLQQQQETATDASRAGTSQNQSAPKSPQEKRKGAGSTSEKPLDAKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTHLEQDLQRARSQGVFMGCGGAGGSISSGAAMFDMEYARWLEDDHRHMAELRTGLQAPLSDGELRVIVDGYLSHYDEVFRLKGMAAKTDVFHLINGMWTSPAERCFLWIGGFRPSELITILIQQLEPLAEQQIMAMCGLRHSSLQAEEALTQGLEQLQQSLVDTIAGGSVADGVQQMVAAMGKLANLEGFVGQADNLRQQTLHQLCRLLTVRQAARCFVVIGEYYGRLRALSSLWASRPRESLISDDNSCQTTTELQMVQPSQNHFSNF* 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00324 487 PANTHER TRANSCRIPTION FACTOR TGA9 125 459 - -
Lapu11g00324 487 Pfam Seed dormancy control 265 339 IPR025422 GO:0006351|GO:0043565
Lapu11g00324 487 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 183 227 IPR004827 GO:0003700|GO:0006355
Lapu11g00324 487 SMART brlzneu 181 257 IPR004827 GO:0003700|GO:0006355
Lapu11g00324 487 Gene3D - 184 232 - -
Lapu11g00324 487 MobiDBLite consensus disorder prediction 89 167 - -
Lapu11g00324 487 MobiDBLite consensus disorder prediction 172 187 - -
Lapu11g00324 487 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 188 203 IPR004827 GO:0003700|GO:0006355
Lapu11g00324 487 FunFam BZIP family transcription factor 184 233 - -
Lapu11g00324 487 Pfam bZIP transcription factor 184 226 IPR004827 GO:0003700|GO:0006355
Lapu11g00324 487 Coils Coil 211 231 - -
Lapu11g00324 487 MobiDBLite consensus disorder prediction 81 187 - -
Lapu11g00324 487 ProSiteProfiles DOG1 domain profile. 248 456 IPR025422 GO:0006351|GO:0043565
Lapu11g00324 487 SUPERFAMILY Leucine zipper domain 185 227 IPR046347 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00324 Lapu-Chr11 6256958 6264265 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00324 157 487 bZIP Transcription Factor Family AT1G08320 72.590 0.0 509
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu11g00324 DOG1 1.1e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00324 K14431 - gmx:778195 828.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00557 5 5060711 5067916 Lapu11g00324 11 6256958 6264265 PCT