Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00320 ATGTACACTCATCACCAACATCAAGGAAAGAACATTCATTCTTCTTCCAGAATGCCAATCCCTTCTGAGAGGCACATGTTCCTTCACACGGGAAATGGATCTGGGGATTCTGGACTTGTTCTCTCAACTGATGCTAAGCCTAGATTGAAATGGACACCAGATCTTCATGCCAGGTTTATAGAAGCTGTGCAGCAGTTAGGGGGAGCTGACAAGGCTACTCCGAAAACGGTAATGAAACTCATGGGGATTTCAGGGCTTACTTTGTATCATCTGAAGAGCCATCTTCAGAAGTACAGATTGAGCAAGAGTCTGCATGGACAAAGTAATAACGCGACACACAAAATCTCCATAAATCCAGGGGCAGCAACAGACGAAAGACTAAGAGAAAACAGTGGAACGCATGTGAACAATTTAAACCTCGCTCCTCAGTCCAATAACAAAGATTTACACATCAGTGAGGCACTACAGATGCAGATAGAGGTTCAAAGAAGACTAAATGAGCAACTTGAGGTGCAAAGACTCCTGCAGCTCCGGATAGAGGCTCAAGGAAAATATCTTCAAGCTGTGCTGGAGAAGGCTCAGGAAACACTTGGTAGACAAAATTTGGGAGTAGTAGGACTTGAAGCTGCCAAACTTCAACTTTCAGATCTGGTGTCCAAAGTGTCCTCTCAGTGTCTGAATTCAGCATTTTTAGAGCTGAAGGAGTTACAAGGATTTAGCCCTCACCAAACACAAACCAACCAGCCAAATGACTGTTCTATGGACAGTTGTCTCACGTCTTGTGAGGTGTCACAAAAAGAGCAAGAGATACAAAATTGGGGGATGAGCTTGAGACCCTTCAATGTCCACACATTCATGGAACGAAAGGAGGTCATAGAGGGTCCGAATCTTAACAACCTACCAAACACTGAACTCAAATGGTGTGATCCAGTGAAGAACACCTTCCTTACCCCATTGAGCAGAAGAAGTCCAAGCAACTTGTCTATGAGCATTGGACTTGAAGGAGACACCGAGAATGGGAGCAGCATTAGGAAAGAATCAGTGAAACCAGTGGCTGAGAAAGTTTCTCAAGATTATGGACTGCCTTCATACTTTGCTGCACCAAAACTGGACCTAACCATTGAAGATAAAGACACTAGAAAAAGTTGTAAAGAACTGGACTTGAATGGATTCAGTTGGAACTAA 1185 0.4363 MYTHHQHQGKNIHSSSRMPIPSERHMFLHTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVQQLGGADKATPKTVMKLMGISGLTLYHLKSHLQKYRLSKSLHGQSNNATHKISINPGAATDERLRENSGTHVNNLNLAPQSNNKDLHISEALQMQIEVQRRLNEQLEVQRLLQLRIEAQGKYLQAVLEKAQETLGRQNLGVVGLEAAKLQLSDLVSKVSSQCLNSAFLELKELQGFSPHQTQTNQPNDCSMDSCLTSCEVSQKEQEIQNWGMSLRPFNVHTFMERKEVIEGPNLNNLPNTELKWCDPVKNTFLTPLSRRSPSNLSMSIGLEGDTENGSSIRKESVKPVAEKVSQDYGLPSYFAAPKLDLTIEDKDTRKSCKELDLNGFSWN* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00320 394 FunFam Myb family transcription factor 45 103 - -
Lapu11g00320 394 Gene3D - 45 103 - -
Lapu11g00320 394 SUPERFAMILY Homeodomain-like 45 101 IPR009057 -
Lapu11g00320 394 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 8 280 IPR044848 GO:0003700
Lapu11g00320 394 Pfam MYB-CC type transfactor, LHEQLE motif 150 196 IPR025756 -
Lapu11g00320 394 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 43 103 IPR017930 -
Lapu11g00320 394 Pfam Myb-like DNA-binding domain 48 99 IPR001005 -
Lapu11g00320 394 Coils Coil 152 172 - -
Lapu11g00320 394 NCBIfam myb-like DNA-binding domain, SHAQKYF class 46 101 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00320 Lapu-Chr11 6217988 6220885 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00320 78 394 G2-like Transcription Factor Family AT3G04030 50.151 2.87e-87 265
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lapu11g00320 Myb_DNA-binding 2.5e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00320 - - gmx:100805237 675.241