Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00307 ATGGAAGATCATCCACCTGGTTTTCGCTTCTTCCCAACAGAAGAAGAGCTTGTTGGCTTCTACCTACACAACAAGCTAGAAGGTTTAAGAAATGCTGCTGCTGCTGCTGCCATAGATAGAGTTATCCCAGTTGTTGATATCAATTCCCTGGAGCCTTGGAACCTCCCAACACTTGCTGGTGAGGTTTGTCGCGGGGATACAGAGCAATGGTTTTTCTTTTCACCTGGGCAAGAGAGAGAAGCCAGGGGAGGGAGACCTAGCAGAACCACAGCTTGTGGATACTGGAAAGCTACTGGTTCTCCTGGCTATGTTTATTCTTCTGATAACAGAATCATTGGGGTGAAGAAATCCATGGTGTTCTACAAAGGTAAAGCCCCTATGGGGAGAAAAACCAAATGGAAGATGAATGAGTACAGAGCCATCTCAGTCCCTCACCAATCCAACCCTGCCACACCTCAGTTGAGAAGCGAATTCAGCTTATATAGAGTGTATATCGTATCTGGAAGCTTTCGAGCATTTGATCGACGTCCATCAGAGACAGAAGGAGCAGCAGAGTCACGTGTTCACCAAAGTTTATCTCAATTTTCTCAGCTACCAGAAGCTGGAGACTCAAGTAGCACAAACTGGAACCAGCTTCAGCTCCAAGAACAACCTTCATGGGAATTGGAATTGGAATGGGAACACTTCAATTGGGTCTAA 699 0.4592 MEDHPPGFRFFPTEEELVGFYLHNKLEGLRNAAAAAAIDRVIPVVDINSLEPWNLPTLAGEVCRGDTEQWFFFSPGQEREARGGRPSRTTACGYWKATGSPGYVYSSDNRIIGVKKSMVFYKGKAPMGRKTKWKMNEYRAISVPHQSNPATPQLRSEFSLYRVYIVSGSFRAFDRRPSETEGAAESRVHQSLSQFSQLPEAGDSSSTNWNQLQLQEQPSWELELEWEHFNWV* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00307 232 SUPERFAMILY NAC domain 3 165 IPR036093 GO:0003677|GO:0006355
Lapu11g00307 232 ProSiteProfiles NAC domain profile. 4 166 IPR003441 GO:0003677|GO:0006355
Lapu11g00307 232 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 4 184 - -
Lapu11g00307 232 Gene3D NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Lapu11g00307 232 Pfam No apical meristem (NAM) protein 5 139 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00307 Lapu-Chr11 6128704 6129649 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00307 7 231 NAC Transcription Factor Family AT5G22380 52.893 4.09e-78 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lapu11g00307 NAM 2.8e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00307 - - gmx:100808618 359.377