Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lapu11g00307 | ATGGAAGATCATCCACCTGGTTTTCGCTTCTTCCCAACAGAAGAAGAGCTTGTTGGCTTCTACCTACACAACAAGCTAGAAGGTTTAAGAAATGCTGCTGCTGCTGCTGCCATAGATAGAGTTATCCCAGTTGTTGATATCAATTCCCTGGAGCCTTGGAACCTCCCAACACTTGCTGGTGAGGTTTGTCGCGGGGATACAGAGCAATGGTTTTTCTTTTCACCTGGGCAAGAGAGAGAAGCCAGGGGAGGGAGACCTAGCAGAACCACAGCTTGTGGATACTGGAAAGCTACTGGTTCTCCTGGCTATGTTTATTCTTCTGATAACAGAATCATTGGGGTGAAGAAATCCATGGTGTTCTACAAAGGTAAAGCCCCTATGGGGAGAAAAACCAAATGGAAGATGAATGAGTACAGAGCCATCTCAGTCCCTCACCAATCCAACCCTGCCACACCTCAGTTGAGAAGCGAATTCAGCTTATATAGAGTGTATATCGTATCTGGAAGCTTTCGAGCATTTGATCGACGTCCATCAGAGACAGAAGGAGCAGCAGAGTCACGTGTTCACCAAAGTTTATCTCAATTTTCTCAGCTACCAGAAGCTGGAGACTCAAGTAGCACAAACTGGAACCAGCTTCAGCTCCAAGAACAACCTTCATGGGAATTGGAATTGGAATGGGAACACTTCAATTGGGTCTAA | 699 | 0.4592 | MEDHPPGFRFFPTEEELVGFYLHNKLEGLRNAAAAAAIDRVIPVVDINSLEPWNLPTLAGEVCRGDTEQWFFFSPGQEREARGGRPSRTTACGYWKATGSPGYVYSSDNRIIGVKKSMVFYKGKAPMGRKTKWKMNEYRAISVPHQSNPATPQLRSEFSLYRVYIVSGSFRAFDRRPSETEGAAESRVHQSLSQFSQLPEAGDSSSTNWNQLQLQEQPSWELELEWEHFNWV* | 233 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lapu11g00307 | 232 | SUPERFAMILY | NAC domain | 3 | 165 | IPR036093 | GO:0003677|GO:0006355 | |
Lapu11g00307 | 232 | ProSiteProfiles | NAC domain profile. | 4 | 166 | IPR003441 | GO:0003677|GO:0006355 | |
Lapu11g00307 | 232 | PANTHER | PROTEIN CUP-SHAPED COTYLEDON 2-RELATED | 4 | 184 | - | - | |
Lapu11g00307 | 232 | Gene3D | NAC domain | 13 | 168 | IPR036093 | GO:0003677|GO:0006355 | |
Lapu11g00307 | 232 | Pfam | No apical meristem (NAM) protein | 5 | 139 | IPR003441 | GO:0003677|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lapu11g00307 | Lapu-Chr11 | 6128704 | 6129649 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lapu11g00307 | 7 | 231 | NAC Transcription Factor Family | AT5G22380 | 52.893 | 4.09e-78 | 233 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | NAC | Lapu11g00307 | NAM | 2.8e-29 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Lapu11g00307 | - | - | gmx:100808618 | 359.377 |