Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00289 ATGTCTTCCACCAAGAAAACTCTTCTTAGAACCGTCTTCACTGCAAACGGAAGCTGTGGTTGCAGCAAAACAAAGGCCTCTGAAGTGCATGACCCAACCCCAAAACCCAAAACCTCCCACACTAACCAAAAACCAAACAACCTTAGCAGCATGGCCTCTTCCACCACTTCAATGGAACACATTGATGAAGAAGAGTTCACCTCTACCACAATATCCGAATCCGAGACTTTTCACGATCACAACCATAACAACAATTTCTTACTCAAACGAAGCCCTCTTGTGGATAGTGTGGCCATTGAGAAGGACTCTTCCAACCCATATCATGATTTCAGACACTCCATGCTCCAAATGATCTTCGAGAAAGAGATCGAGTCTGAGAACGATCTTCAAGATCTTCTGCAATGCTTTCTTCACCTTAATGCACCATGTCACCACCATGTCATCGTGAAAGCCTTCAATGCCATCTGCGAAGAAGCGTTTCCTCGCAAGGTTAGTACTACTCCGGCTGCGTCTGAACCTTCTCCCTCTCGCCGGAGCAGCCCCCTCGTGGCTCCAAAGAGCAAGTGA 567 0.4709 MSSTKKTLLRTVFTANGSCGCSKTKASEVHDPTPKPKTSHTNQKPNNLSSMASSTTSMEHIDEEEFTSTTISESETFHDHNHNNNFLLKRSPLVDSVAIEKDSSNPYHDFRHSMLQMIFEKEIESENDLQDLLQCFLHLNAPCHHHVIVKAFNAICEEAFPRKVSTTPAASEPSPSRRSSPLVAPKSK* 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00289 188 ProSiteProfiles OVATE domain profile. 99 158 IPR006458 -
Lapu11g00289 188 MobiDBLite consensus disorder prediction 21 58 - -
Lapu11g00289 188 Pfam Transcriptional repressor, ovate 103 158 IPR006458 -
Lapu11g00289 188 NCBIfam uncharacterized plant-specific domain TIGR01568 97 156 IPR006458 -
Lapu11g00289 188 MobiDBLite consensus disorder prediction 38 57 - -
Lapu11g00289 188 MobiDBLite consensus disorder prediction 167 188 - -
Lapu11g00289 188 MobiDBLite consensus disorder prediction 164 188 - -
Lapu11g00289 188 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
Lapu11g00289 188 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 36 159 IPR038933 GO:0045892
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00289 Lapu-Chr11 5965325 5966902 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lapu11g00289 Ovate 3.7e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00289 - - gmx:102660065 270.011