Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00275 ATGGGGTTTTTGCTCAAAGAGGTTTTGAGGACTCTGTGCTCAAGGAATCGCTGGTCTTATGCCGTGTTTTGGAAGATCGGTTGCAACAATTCCAAGCTGTTAATCTGGGAAGATTACTACTATGAACCCTTGCCATCTCCTTTCCCTCCACGAACTGTTGGGATGTCTAATTTTCCATATCGAGACGGGGAAGGGTGCTGGTTTTCTTCTGAGTCTCAGCTGGGGATTCAGGAGGAGGACAGAGTCGGTGGATTGATTAACAAAATGATGGTGAATAATTCAGTCAGTATTGCTGGAGAAGGGGTAGTTGGACGGGCAACATTTACAGGAAACTATCAGTGGATTCTTATGAACAATTTTAGTAGAGATGCATATCCACCAGAGGTATATCCCGAGTTGCATTACCAATTTTCAGCTGGAATGCAGACAGTAACAGTTATTCCTGTGCTTCCCCATGGGGTTGTTCAATTTGGTTCTTTATTGCCGATAATGGAAGATATTGGATTTGTAAATGATGTGAAGAACCTGATCTTGCAATTGGGATGTGTACCTGGTGCCCTTCTTTCTGAAGACTATTCAGCAAAAGTTTCTAATGAAAGACTTGGTGTACCTGTCACTGTTGATCCATCTGTCGTTAGTTCTAACTGCACTCCCTCTGCAGCTAATGGTTCCAATCAGCTAACTAATTCTACTCTTGCTTCAAGGCCTATTGCTCTATCACCTCATCCTCTAAGGGGAGAAATAGATAATTACCAGGGTTCTGTATTGACACCTCAAACCTATGACCAAAACCAAATATTTGATAGCATTTGCCAACCAAAGGCTCATTCAATGATCAAAACAAATGCCTATGGCCAACAGAAGAAGGCAGTCGTTGAGGCTGAAGCTAAAGTGATACCCGGAAATTTTGATTCATGTATGCAACAGCATTCTGCTTATAATGCCAGATCTGCATTCAATGAATTAGCTGGTTTCAATCAATCAAATCTGAGTTGCAGGCTCAACTATATGGAACAACAAACATCAGGTGTTGGAAGACAGAGTCACGTCAATCCGAACATGAATCCATCAAGTGCCTCAAATATGGCTCAACTGAAAACAGGTGGAGGCAAAACTTTTGAACAGAATCAGAGTTCTGGTACCAGTGCAGTATTTGGAGGAATCCCAATATCTGGTGGGAGTTATATTTTGAGGACAAATATGATTAACTGCTCCCTTTCAAATTCTCCCAAAGAACCCACTTCTGAATTTTCTGGAACTCACAAGGTTGGGTTTGGACTTCAAAATAACAATTCAACAGCTGATGCTGCGCTCTGTTCTGTACCTAATTTCTGTAATCAATCAGTTACTAGTCACGTTAATCTTGAAAACTCTGCTCATAAGAACCTTCCCATTGGTTTAAAGCATGCTTCTGATGCTTTCCTTTCAACTGATCAAAGGATACATGATAATTTGCTTCATGCTGCCCTTAAGATTCCATCTTTTCATCTAGAGGAGCATGTGCCTATGGGTGATCAAATCCCTGGTTTTGTTCAAGATTGCCTCAATAAAGATGTTACTAGTCATAATATGGTGAAAACGAATGTTAAGCACGAAGACACCTATACTCAACTTCCATCAGGTGATGATCTCTTTGATGTTTTAGGCGTGGATTTGAAAAGGCGACTACTCAATGGAAACTGGGATAAGTTGCTTACCACGGATTCAGATGCCAACAGAGAGCTTCTAGATAAAAAGGCAACATGCATGAATTTGCAAGGTGTACGTCCTGATAATAGCTATTCAGTTAAAGAAGCAACAGCAGACAGTGGCATCTTCTCTGGAACGGGCACTGACCACCTCTTAGATGCTGTTGTTTCAAAAGCTCAATCTGCTCCAAAACAGAGTTCTGATGAAATGTCTTGCAGGACAACATTGACAAGGGTTAGTACTGCCTCCGTTTCCTCTCCTGCCTGCAAGCCGGTTCTGTCTGATCATGTTCTGAAGGGATTGTTGGATTTTCCCAAGAATGGGGCTAAAAGAGCTGCTGGGGAAACAAGTTCTCTTAGGTCTGGGTGCAGCAAGGATGATGCTGGAAACTGCTCTCAAACTACTTCCATATACGGGTCTAAGCTTAGTTCGTGGGTTGAGAATGGTAGTAATGTGAAACGTGAAAGCAGCGTTTCAACTGGATACTCTAAGAGGCCAGAAGAAGTTTGCAAATCAAATAGGAAAAGACTCAAACCTGGAGAGAATCCTAGACCTCGACCTAAAGATCGCCAAATGATTCAAGATCGCGTGAAAGAATTAAGGGAAATTGTGCCAAATGGAGCAAAATGTAGCATAGATGCACTTCTGGAAAAGACCATTAAGCATATGCTTTTCCTGCAAAGTGTAACAAAGCATGCGGACAAGCTGAAACAGACAGGGGAATCTAAGATTGTTAGTAAAGAAGGTGGGTTGCTATTAAAAGATAACTTTGAGGGAGGGGCTACATGGGCATATGAGGTTGGCTCGCAATCAATGGTTTGTCCAATCATTGTTGAGGATCTTAATCCACCTCGTCAGATGCTAGTAGAGATGCTTTGTGAGGAACGGGGTTTCTTTCTGGAAATAGCTGACTTAATCAGAGGATTAGGTTTAACCATCTTGAAGGGAGTTATGGAAGTCCGTAATGACAAGATCTGGGCACGCTTTGCTGTTGAGGCAAACAGGGATGTGACGAGGATGGAAATATTTATGTCACTGGTTCGTCTTTTGGATCAAACAGTGAAGGGAGGTGCATCTTCATCGAATGCAACTGATAACATGGTGTATCATTCTTTTCCACAAGCTACCCAGATACCTGCAACTGGTAGGCCTAGTAGTTTGCAATGA 2856 0.4209 MGFLLKEVLRTLCSRNRWSYAVFWKIGCNNSKLLIWEDYYYEPLPSPFPPRTVGMSNFPYRDGEGCWFSSESQLGIQEEDRVGGLINKMMVNNSVSIAGEGVVGRATFTGNYQWILMNNFSRDAYPPEVYPELHYQFSAGMQTVTVIPVLPHGVVQFGSLLPIMEDIGFVNDVKNLILQLGCVPGALLSEDYSAKVSNERLGVPVTVDPSVVSSNCTPSAANGSNQLTNSTLASRPIALSPHPLRGEIDNYQGSVLTPQTYDQNQIFDSICQPKAHSMIKTNAYGQQKKAVVEAEAKVIPGNFDSCMQQHSAYNARSAFNELAGFNQSNLSCRLNYMEQQTSGVGRQSHVNPNMNPSSASNMAQLKTGGGKTFEQNQSSGTSAVFGGIPISGGSYILRTNMINCSLSNSPKEPTSEFSGTHKVGFGLQNNNSTADAALCSVPNFCNQSVTSHVNLENSAHKNLPIGLKHASDAFLSTDQRIHDNLLHAALKIPSFHLEEHVPMGDQIPGFVQDCLNKDVTSHNMVKTNVKHEDTYTQLPSGDDLFDVLGVDLKRRLLNGNWDKLLTTDSDANRELLDKKATCMNLQGVRPDNSYSVKEATADSGIFSGTGTDHLLDAVVSKAQSAPKQSSDEMSCRTTLTRVSTASVSSPACKPVLSDHVLKGLLDFPKNGAKRAAGETSSLRSGCSKDDAGNCSQTTSIYGSKLSSWVENGSNVKRESSVSTGYSKRPEEVCKSNRKRLKPGENPRPRPKDRQMIQDRVKELREIVPNGAKCSIDALLEKTIKHMLFLQSVTKHADKLKQTGESKIVSKEGGLLLKDNFEGGATWAYEVGSQSMVCPIIVEDLNPPRQMLVEMLCEERGFFLEIADLIRGLGLTILKGVMEVRNDKIWARFAVEANRDVTRMEIFMSLVRLLDQTVKGGASSSNATDNMVYHSFPQATQIPATGRPSSLQ* 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00275 951 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 5 176 IPR025610 -
Lapu11g00275 951 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 740 789 IPR011598 GO:0046983
Lapu11g00275 951 MobiDBLite consensus disorder prediction 730 754 - -
Lapu11g00275 951 CDD bHLH_AtLHW_like 744 813 - -
Lapu11g00275 951 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 945 IPR043561 GO:0003700|GO:0006355
Lapu11g00275 951 MobiDBLite consensus disorder prediction 712 726 - -
Lapu11g00275 951 MobiDBLite consensus disorder prediction 712 754 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00275 Lapu-Chr11 5809054 5816967 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00275 542 945 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 53.056 5.26e-121 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00275 - - gmx:100786351 1575.45
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu5g00592 5 5409816 5417388 Lapu11g00275 11 5809054 5816967 PCT