Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00269 ATGGACGTTGATTCCTCCATGGTGCCGGAGGCGGATCACGATCCGGCGGTGCAGAATCATACCGAGAGAGACCAGTTAGGAGAGTCGCCGCCTCCGTCGCCGCCGCCTTTGTCGACGGGAGGTGGATCTCCGTCTCAGCCGCCGTCGCAACAGCAGCCGTCGTCGCCGGTGACGGCGGGTCAGGTGCAGCACAGTCCGGTGGTTGGTCCGAGACTCGCGCCGACTTACTCAGTGGTGAATGCGATTTTGGAGAAGAAGGAGGACGGGCCAGGACCGCGATGCGGCCACACGTTGACGGCGGTGGCGGCGGTCGGAGAGGAGGGGACGTCGGGGTACATTGGTCCGAGGCTGATTTTGTTCGGCGGTGCCACTGCGCTTGAAGGGAATTCCGCGGCCTCAGGGACTCCTTCATCCGCTGGAAATGCAGGCATACGTTTAGCTGGTGCCACGGCTGATGTTCACTGTTATGATGTCTTAACCAATAAGTGGTCTAGGATAACTCCCATCGGTGAGCCTCCAACCCCTAGGGCCGCACATGTGGCAACTGCTGTGGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCTGCAGAGGATCTTCATGTTCTTGATCTCACTCAGCAACGACCACGATGGCATAGAGTTGGTGTTCCTGGCCCTGGACCAGGGCCACGTTATGGACATGTTATGGCTTTGGTGGGGCAGAGGTATCTCATGGCAATTGGAGGCAATGATGGAAAGAGACCTTTGGCTGATGTATGGGCTTTAGACACAGCTGCCAAGCCTTATGAATGGCGCAAGTTGGAGCCAGAAGGAGAGGGTCCACCTCCATGCATGTATGCGACTGCCAGTGCTCGTTCAGATGGGCTTCTTCTGCTTTGTGGAGGGAGGGATGCCAATAGTGTCCCATTGGCAAGTGCATATGGGCTTGCTAAGCATAGAGATGGTCGTTGGGAATGGGCCATTGCCCCTGGTGTCTCACCATCTCCAAGATATCAACATGCAGCAGTATTTGTTAATGCAAGGCTCCATGTGTCCGGTGGCGCTCTTGGAGGAGGACGGATGGTTGAAGATTCATCAAGTGTTGCTGTGTTGGACACTGCCGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACGGGTAGATACAGTGCTGATGCTGCTGGTGGAGATGCCTCAGTTGAGTTGACACGGCGTTGTAGGCATGCTGCTGCTGCTATTGGTGACTTGATTTTTATCTATGGTGGTTTACGTGGTGGGGTCTTGCTGGACGATCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAGCTGCTGCTTCACATGCAGCAGCTGCAGCTGCATCTAATGCACAAGCTGGAAGACTACCTGGACGATATGGTGGATTTGTTGATGATAGGACAAGGCAAACCATGGTTGAAGCAGCTCCTGATGGTGCAGTTGTTTTGGGAAATCCAGTTGCCCCCCCTGTAAATGGGGACATATATACTGATATCAGCACTGAAAATGCCTTACTCCCAGGATCTAGGCGAACAAGCAAAGGAGTTGAGTATCTAGTTGAAGCATCAGCTGCAGAAGCTGAAGCTATCAGTGCGACGTTGGCTGCTGCTAAAGCACGACAAGTAAATGGGGAAGTTGAATTGCCTGACCGAGATCGTGGGGCTGAGGCAACACCTAGTGGGAAACAAATATCTTCCTTGATTAAGCCTGATTCTTCTGTGTCAAATAGCATTCCTCCTGGTGGAGTGAGGTTGCATCACAGAGCTGTGGTTGTTGCTGCAGAGACTGGTGGAGCATTAGGTGGCATGGTTAGACAACTTTCAATCGATCAGTTTGAGAATGAAGGCAGGCGAGTCAGTTATGGGACTCCTGAAAGTGCAACAGCTGCTAGAAAATTATTAGACCGGCAGATGTCTATCAATAGTGTCCCAAAGAAGGTTGTAGCGCACCTCTTAAAGCCTCGTGGCTGGAAACCGCCAGTTCGGCGACAGTTTTTCTTGGACTGCAATGAAATTGCGGATCTTTGTGATAGTGCAGAACGGATATTTTCAAGTGAACCAAGCGTCTTACAGCTTAGGGCTCCAATTAAAATATTTGGCGATTTACATGGGCAATTTGGAGATCTCATGCGCCTCTTTGATGAGTATGGTTCACCATCAACTGCTGGTGACATAGCATACATCGACTATCTATTCCTTGGAGATTATGTTGATAGGGGACAACACAGCCTGGAAACTATTAGCCTTCTGCTTGCTCTGAAGGTTGAGTATCCAAACAACGTGCATTTAATACGTGGAAACCATGAAGCTGCAGATATTAATGCCCTTTTTGGTTTCCGAATAGAGTGCATTGAGAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCACCGTATAAACCGTCTGTTTAATTGGCTTCCTCTGGCAGCACTAATTGAGAAAAAAATTATTTGCATGCATGGGGGTATTGGTCGTTCAATAAATCACGTGGAACAAATTGAGAATATTCAGCGTCCAATTACGATGGAAGCAGGATCAATTGTGCTCATGGATCTATTGTGGTCTGACCCTACAGAGAATGACAGTGTGGAAGGGCTGCGTCCAAATGCTCGGGGTCCAGGATTAGTTACTTTTGGGCCTGATCGGGTCATGGAATTTTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGCTTCGAGCGTTTTGCCCAGGGACATTTGATCACACTTTTTTCTGCGACAAACTACTGTGGTACCGCAAATAATGCTGGGGCGATTTTAGTTTTGGGTAGAGATCTTGTTGTGGTTCCTAAATTGATTCATCCATTACCACCTGCAATTTCTTCACCAGAAACTTCACCGGAGCGACATATTGAGGACACATGGATGCAGGAGTTGAATGCCAACAGACCACCAACACCAACAAGAGGCCGTCCTCAAGTAACAAATGAACGAGGTTCTCTTGCTTGGATATGA 3024 0.4964 MDVDSSMVPEADHDPAVQNHTERDQLGESPPPSPPPLSTGGGSPSQPPSQQQPSSPVTAGQVQHSPVVGPRLAPTYSVVNAILEKKEDGPGPRCGHTLTAVAAVGEEGTSGYIGPRLILFGGATALEGNSAASGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPIGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVGVPGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWRKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTAAASHAAAAAASNAQAGRLPGRYGGFVDDRTRQTMVEAAPDGAVVLGNPVAPPVNGDIYTDISTENALLPGSRRTSKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKQISSLIKPDSSVSNSIPPGGVRLHHRAVVVAAETGGALGGMVRQLSIDQFENEGRRVSYGTPESATAARKLLDRQMSINSVPKKVVAHLLKPRGWKPPVRRQFFLDCNEIADLCDSAERIFSSEPSVLQLRAPIKIFGDLHGQFGDLMRLFDEYGSPSTAGDIAYIDYLFLGDYVDRGQHSLETISLLLALKVEYPNNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENIQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPETSPERHIEDTWMQELNANRPPTPTRGRPQVTNERGSLAWI* 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00269 1007 MobiDBLite consensus disorder prediction 551 589 - -
Lapu11g00269 1007 MobiDBLite consensus disorder prediction 983 1007 - -
Lapu11g00269 1007 Pfam Kelch motif 334 380 IPR011498 GO:0005515
Lapu11g00269 1007 SUPERFAMILY Metallo-dependent phosphatases 662 967 IPR029052 -
Lapu11g00269 1007 CDD MPP_Bsu1_C 656 958 IPR041758 -
Lapu11g00269 1007 FunFam Serine/threonine-protein phosphatase 640 980 - -
Lapu11g00269 1007 MobiDBLite consensus disorder prediction 983 998 - -
Lapu11g00269 1007 MobiDBLite consensus disorder prediction 1 71 - -
Lapu11g00269 1007 Gene3D - 75 200 IPR015915 GO:0005515
Lapu11g00269 1007 PRINTS Serine/threonine phosphatase family signature 922 938 IPR006186 GO:0016787
Lapu11g00269 1007 PRINTS Serine/threonine phosphatase family signature 739 766 IPR006186 GO:0016787
Lapu11g00269 1007 PRINTS Serine/threonine phosphatase family signature 840 867 IPR006186 GO:0016787
Lapu11g00269 1007 PRINTS Serine/threonine phosphatase family signature 810 836 IPR006186 GO:0016787
Lapu11g00269 1007 PRINTS Serine/threonine phosphatase family signature 704 731 IPR006186 GO:0016787
Lapu11g00269 1007 PRINTS Serine/threonine phosphatase family signature 900 920 IPR006186 GO:0016787
Lapu11g00269 1007 PRINTS Serine/threonine phosphatase family signature 772 796 IPR006186 GO:0016787
Lapu11g00269 1007 Gene3D - 201 457 IPR015915 GO:0005515
Lapu11g00269 1007 SMART pp2a_7 676 960 IPR006186 GO:0016787
Lapu11g00269 1007 MobiDBLite consensus disorder prediction 568 588 - -
Lapu11g00269 1007 SUPERFAMILY Kelch motif 148 437 IPR015915 GO:0005515
Lapu11g00269 1007 FunFam Serine/threonine-protein phosphatase 72 269 - -
Lapu11g00269 1007 MobiDBLite consensus disorder prediction 43 62 - -
Lapu11g00269 1007 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 1 1007 - -
Lapu11g00269 1007 Pfam Galactose oxidase, central domain 228 281 - -
Lapu11g00269 1007 Gene3D - 640 980 IPR029052 -
Lapu11g00269 1007 PIRSF STPPP_BSU1 39 1007 IPR012391 GO:0004721|GO:0009742
Lapu11g00269 1007 Pfam Calcineurin-like phosphoesterase 704 911 IPR004843 GO:0016787
Lapu11g00269 1007 FunFam Serine/threonine-protein phosphatase 273 472 - -
Lapu11g00269 1007 ProSitePatterns Serine/threonine specific protein phosphatases signature. 773 778 IPR006186 GO:0016787
Lapu11g00269 1007 MobiDBLite consensus disorder prediction 28 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00269 Lapu-Chr11 5637872 5655475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00269 668 903 Calmodulin-binding Proteins AT5G63870 29.044 2.30e-25 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00269 - - gmx:100816091 1804.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00269 11 5637872 5655475 Lapu11g00269 11 5637872 5655475 ECH
Lapu5g00599 5 5508273 5519791 Lapu11g00269 11 5637872 5655475 PCT