Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lapu11g00261 | ATGAGTGATATAAGGAAGTGGTTCATGAAATCACATGACAAGGGCAACAATGCGGCTCCCTCCAAGCCTTCAAATCAACCCAAGCCTTCTTCGGATAAGCCCCAATCCGAGAAAAACGTGGCTGGAGGTCAAGAAAGTTCAGGGAGGAGGGTAACTAGCAAATATTTTAACACAAACAAGCAAAAGGTGAAAGATGAGAAAGAAACTCAGAAGCTACCTGCTAAAAGAAAGAGTGTGAAGGACAGTGAAGATATACCAGAGCCTAAGAAAATTCATGAAGATGTTGGAGATGATTCTGTCTTGCCCACTAATAAAAAGAAGTTAGCTGAGGCCACTCCGACAAAAAAATTGAAGAGTGTATCAGGTAGGGGGATTCCTAAAAGATCTGCAATTTTGGAAGAAAGTGATGAAGATGATGACAAGGATGCTGTGTCTGCTGTTAAATCTGCTGGAAGGGGTGGTGGTGGGAGAGGAGCACCTGGGCGATCAACTGGTGGGAGAGGTAGAGGAGGTGGTAGGGGTGGATTCATGAATTTTGGAGAAAGAAAAGATCCTCCACACAAAGGAGAAAAGGAAGTTCCTGAAGGTGCTACTAACTGTTTAGCTGGCTTGACTTTTGTGATCAGTGGAACACTTGACAGTTTGGAACGTGAAGAAGCTGAAGATTTGATTAAACGCCATGGTGGCCGCATCACTGGATCAGTCAGCAAGAAAACGAATTATCTGTTATGCGATGAAGATATTGGGGGACGGAAGTCTGAAAAAGCAAAAGAGCTAGGAACTTCCTTCCTCACGGAGGATGGATTGTTTGATATGATTCGTGCATCCAAACCTGCAAAAGCTCCTTCACAAGCAGAAAAGAAATCTGTGAATAATGCTGTTGCAGTAGCATCCCAGTCAAAAGTTTCTCCAAAATCACAAGTTAAGGCCCCTCTGTCTTTGCGCTCACCTTCTAAGCAAGCTAAGCCAAAGGCTGTGACTACTGTTCAATCTTCTGTGATGTGGACAGAGAAATTTCGACCTAAAGATCCGAGGGATATCATAGGGAATCAGTCACTTATTGTACAACTTCGTAATTGGTTGAAAGCTTGGCATGAGCAATTTTTGGACACCGGTAACAAAAAACAGGGAAAAAAGCAAAATGATTCTGGTTTGAAAAAAGCTGTGTTGTTAAGTGGAACCCCTGGTATAGGGAAAACAACTTCAGCAAAGTTGGTCTGTGAGGAGCTTGGTTTCCAAGCCATAGAGGTAAATGCTAGTGATAGCCGTGGAAAAGCTGATAGCAAAATTGAAAGAGGAATTAGTGGAAGCAAGACAAATTCTGTTAAGGAGCTTGTAACCAATGAGGCCCTTGGTGCTAATATGCAACGGTCCAAGCTTTCCAAATCTGTGCTCATTATGGATGAGGTTGATGGGATGTCAGCTGGTGATAGGGGTGGTGTTGCTGATCTTATTGCTAGCATCAAAATATCAAAAATTCCTATTATCTGCATTTGTAATGACCGTTACAGCCAGAAACTTAAAAGCCTTGTGAACTACTGTTTGCTCCTAAGTTTTCGGAAGCCTACAAAGCAACAGATGGCAAAGAGGTTGATGGATGTTGCAAAGGCTGAAGGGCTTCAAGTTAATGAGATTGCACTTGAGGAACTAGCAGAGAGAGTTAATGGAGATATGCGAATGGCAGTAAACCAGTTACAGTATATGAGCCTCTCTATGTCAATTATCAACTATGACGACATTAGACAACGCTTTCTTACCAATGCAAAGGATGAAGACATTTCACCATTCACAGCTGTTGATAAGCTTTTTGGTTTTAATGCTGGGAAGTTGAAAATGGATGAGAGGATAAATCTTAGCATGAGTGATCCTGATCTTGTTCCTCTTCTTATCCAGGAAAATTATATTAATTATAAACCAAGCTTGGCTGGTAAGGATGACAATGGCATAAAACGCATGAACCTGATGGCCCGTGCTGCTGAGTCTATTGCTGACGGGGATATAGTGAATGTACAGATTCGCAGATATCGACAGTGGCAACTCTCTCAAACTAGTTCTACAGCAACATGCATAATTCCGTACTGCGTCCTTATTGCACGGGCAAAGAGAAATACTTGA | 2115 | 0.4222 | MSDIRKWFMKSHDKGNNAAPSKPSNQPKPSSDKPQSEKNVAGGQESSGRRVTSKYFNTNKQKVKDEKETQKLPAKRKSVKDSEDIPEPKKIHEDVGDDSVLPTNKKKLAEATPTKKLKSVSGRGIPKRSAILEESDEDDDKDAVSAVKSAGRGGGGRGAPGRSTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEGATNCLAGLTFVISGTLDSLEREEAEDLIKRHGGRITGSVSKKTNYLLCDEDIGGRKSEKAKELGTSFLTEDGLFDMIRASKPAKAPSQAEKKSVNNAVAVASQSKVSPKSQVKAPLSLRSPSKQAKPKAVTTVQSSVMWTEKFRPKDPRDIIGNQSLIVQLRNWLKAWHEQFLDTGNKKQGKKQNDSGLKKAVLLSGTPGIGKTTSAKLVCEELGFQAIEVNASDSRGKADSKIERGISGSKTNSVKELVTNEALGANMQRSKLSKSVLIMDEVDGMSAGDRGGVADLIASIKISKIPIICICNDRYSQKLKSLVNYCLLLSFRKPTKQQMAKRLMDVAKAEGLQVNEIALEELAERVNGDMRMAVNQLQYMSLSMSIINYDDIRQRFLTNAKDEDISPFTAVDKLFGFNAGKLKMDERINLSMSDPDLVPLLIQENYINYKPSLAGKDDNGIKRMNLMARAAESIADGDIVNVQIRRYRQWQLSQTSSTATCIIPYCVLIARAKRNT* | 705 |
Showing 1 to 1 of 1 entries
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lapu11g00261 | 704 | CDD | BRCT_RFC1 | 196 | 274 | - | - | |
| Lapu11g00261 | 704 | Gene3D | - | 594 | 703 | - | - | |
| Lapu11g00261 | 704 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 333 | 582 | IPR027417 | - | |
| Lapu11g00261 | 704 | FunFam | Replication factor C subunit 1 | 333 | 521 | - | - | |
| Lapu11g00261 | 704 | FunFam | Replication factor C subunit 1 | 172 | 275 | - | - | |
| Lapu11g00261 | 704 | MobiDBLite | consensus disorder prediction | 59 | 113 | - | - | |
| Lapu11g00261 | 704 | FunFam | Replication factor C subunit 1 | 522 | 593 | - | - | |
| Lapu11g00261 | 704 | FunFam | Replication factor C subunit 1 | 594 | 702 | - | - | |
| Lapu11g00261 | 704 | Pfam | BRCA1 C Terminus (BRCT) domain | 198 | 273 | IPR001357 | - | |
| Lapu11g00261 | 704 | CDD | HLD_clamp_RFC | 522 | 580 | - | - |
Showing 1 to 10 of 27 entries
Functional genes information
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Lapu11g00261 | K10754 | - | gmx:100790070 | 1167.14 |
Showing 1 to 1 of 1 entries