Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00250 ATGGTTAGAGGTGGTGGACTCTCCATGGATTCAGATCCAATTGGGAGCTTCTTCCTCCACAAGCCTATTGTTCTCAACTCTTTCCCTGAAGACACAAACCACCCCAAGTGGAAACTTAGTCCCCACAACAACATGGACGCCACTGTTAGCGCCAAAGACACCATCCCCTTCCAAGTCAACCTCAGCTGTTCTCCAAACAATCATGACTCTTCCCCACCACCCTTCCCCAACAGAACCGAGATGAACTTCTTCTCCGACAACAACAAGGACGACAACGTTTCCGCTTCTGCATCTAATCATCATCATTCCGCCACTTCACCTACGTTGGAATTCAAAGTAAACACTGGTCTGAATCTTCTTACTGCCAACACTAGCAGTGATCAATCTATGGTGGATGATGAGATATCACCCAATTCAGAAGACAAAAGAGCTAAGAATGAGCTTGCTGTTCTTCAAGCTGAGCTTGAGAGAATGAAGAGGGAGAACCAAAAGTTAAGGGACACGCTTGATCAGGTTAACATCAATTACGATGCACTTCAGATGCATTTTATGAATTTGATGCAGCAACAGAAGGCCGACGAAGTTGAAGAACAAAAAGTGGTTGGAGGAAAGCTAGAAGATAAGAAGCAAGGTGAGAGTGGTGGGGCATTGGTGCCAAGACAGTTCATGGATCTTGGATTGGCTACTAATGCGGACACTGATGAACCCTCTTCTTCATCAGGTGGAAGGAGTCAAGATCGATCAGGATCACCGAACGCAGAAGTGGCTTCGAAGGAATTAGGGACCAGTAAGAATGAGAATGTTAATGATGAAGGGTATGACCAAGAGAAGAAGGAATATGGTAGAGGAGTTGAAAGTGAGGATAGTCCCTCAGCTCATGCCTTTGCTGGTGGTAAAGTTCCAAGTTTCAGTCCTCCAAAGAATAACGTTGAACAGGCTGAGGCAACCATGAGGAAGGCAAGAGTTTCTGTTAGAGCTCGATCAGAAGCACCCATGATCACTGATGGGTGTCAATGGAGAAAGTATGGGCAGAAGATGGCCAAAGGAAACCCATGTCCTAGAGCTTATTATAGGTGTACCATGGCTGCTGGTTGCCCAGTTAGAAAACAGGTACAAAGGTGTGCTGAAGACCGAACAGTTCTCGTCACAACCTATGAAGGCAATCACAACCACCCTTTGCCTCCAGCAGCTATGGCAATGGCACAAACCACTTCCTCAGCAGCAAGAATGCTTCTTTCTGGATCAATGTCTAGTGCTGACAACCTAATGAATGCAAACTTCCTTACAAGGACACTCCTCCCTTGCTCTTCAAGCATGGCTACTATCTCAGCATCTGCTCCATTCCCAACTGTTACATTGGACCTAACACAATCTCCAAACCCTCTACAATTCCCAAGGCACCCAAATCAGCTACAAATTCCCCTCCAAGGTGTACCTCGGAATTTGGCAAACTCCCCAGCCTCTTTAATGCCTCAGATATTTGGACAAGCACTCTACAATCAATCAAAGTTTTCTGGTCTTCAAATGTCACATGATGCAGACCCTTCACAATTTAGTCACCACCCTCAGCAGTTACCACCACACCTTACTGACACAGTTAGTGCTGCCATTGCTGCTGATCCAAACTTCACTGCAGCTTTGGCAGCAGCTATCACTTCCATTATTGGTGGTGCTCAGCAACACAACAACAGTAATACTAGTAACAATAATGGCAACATGACAGCCAGCAACACCACTGGCAATGGCAACATCACAAGTAGCAACAACAGCAACGGAAAGCAATAA 1785 0.4583 MVRGGGLSMDSDPIGSFFLHKPIVLNSFPEDTNHPKWKLSPHNNMDATVSAKDTIPFQVNLSCSPNNHDSSPPPFPNRTEMNFFSDNNKDDNVSASASNHHHSATSPTLEFKVNTGLNLLTANTSSDQSMVDDEISPNSEDKRAKNELAVLQAELERMKRENQKLRDTLDQVNINYDALQMHFMNLMQQQKADEVEEQKVVGGKLEDKKQGESGGALVPRQFMDLGLATNADTDEPSSSSGGRSQDRSGSPNAEVASKELGTSKNENVNDEGYDQEKKEYGRGVESEDSPSAHAFAGGKVPSFSPPKNNVEQAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTVLVTTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSADNLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTQSPNPLQFPRHPNQLQIPLQGVPRNLANSPASLMPQIFGQALYNQSKFSGLQMSHDADPSQFSHHPQQLPPHLTDTVSAAIAADPNFTAALAAAITSIIGGAQQHNNSNTSNNNGNMTASNTTGNGNITSSNNSNGKQ* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00250 594 MobiDBLite consensus disorder prediction 562 594 - -
Lapu11g00250 594 ProSiteProfiles WRKY domain profile. 328 394 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu11g00250 594 MobiDBLite consensus disorder prediction 231 268 - -
Lapu11g00250 594 FunFam probable WRKY transcription factor 31 318 395 - -
Lapu11g00250 594 MobiDBLite consensus disorder prediction 62 108 - -
Lapu11g00250 594 Pfam WRKY DNA -binding domain 335 392 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lapu11g00250 594 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 117 572 IPR044810 GO:0003700
Lapu11g00250 594 SUPERFAMILY WRKY DNA-binding domain 326 394 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu11g00250 594 Gene3D WRKY domain 318 395 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lapu11g00250 594 Coils Coil 141 182 - -
Lapu11g00250 594 MobiDBLite consensus disorder prediction 269 286 - -
Lapu11g00250 594 MobiDBLite consensus disorder prediction 229 310 - -
Lapu11g00250 594 SMART WRKY_cls 333 393 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00250 Lapu-Chr11 5461552 5464606 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00250 113 569 WRKY Transcription Factor Family AT1G62300 53.092 4.16e-134 401
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lapu11g00250 WRKY 5.1e-24 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00250 - - gmx:100797998 776.163
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00250 11 5461552 5464606 Lapu6g01611 6 15994632 15997428 ECH
Lapu11g00250 11 5461552 5464606 Lapu11g00250 11 5461552 5464606 ECH
Lapu5g00621 5 5763225 5765877 Lapu11g00250 11 5461552 5464606 PCT