Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00241 ATGGAGGTGGTGAAGGCTGCATTTGGAGATGCAATTTTGACATCAATGTGGGTTTTCATTATCTCAACTTTGAGGATTGCTTCAACTGAGGTAGCACTTTTCCTGAGTCTCCAACCCCTCTCATTTGCAGGGCTCTTGATCAGCACCATCCTGAACACTCTCTATGTCATCACCATAAGCTTCATAGGAAGGGTCTTAGGAGGTGCCAGCTTCAACCCTTCAACCACAGTTTCATTCTACACTGCAGGCCTGAGGCCTGACTCATCTCTTGCATCAATGGCTGTTAGGTTCCCTGCTCAGGCGTTTGGTGGGGCTGTTGGAGCCAAGGCTCTTCTTCTGGTGATGCCATCTCAGTACAAGCACATGCTGAAAGGTCCTTTCTTGAAGGTGGACTTGCACACTGGAGCTGTTGCAGAGGGGCTGTTGACTTTCACTCATAACATGGCTATCCTCTTTGTCATGCTCAAAGGTCCAAAGAACCCTTTTCTGAAGGTGTATTTGCTTTCTGTGGCTACTGCTGCTTTGGTCATCCCTGGTGCTGGGTTCACTGGGCCTTCCATGAACCCTGCCAATGCCTTTGGATGGGCTTTTATCAACAACAAGCACAACACTTGGGAGCAGTTTTATGTGTACTGGATATGTCCCTTCATAGGGGCATCTTCAGCTGCTTTCATGTATCGTTCTATATTCATGTCACCAATCAAGCAGAAGAAGGCTTGA 720 0.4764 MEVVKAAFGDAILTSMWVFIISTLRIASTEVALFLSLQPLSFAGLLISTILNTLYVITISFIGRVLGGASFNPSTTVSFYTAGLRPDSSLASMAVRFPAQAFGGAVGAKALLLVMPSQYKHMLKGPFLKVDLHTGAVAEGLLTFTHNMAILFVMLKGPKNPFLKVYLLSVATAALVIPGAGFTGPSMNPANAFGWAFINNKHNTWEQFYVYWICPFIGASSAAFMYRSIFMSPIKQKKA* 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00241 239 PRINTS Major intrinsic protein family signature 209 229 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu11g00241 239 PRINTS Major intrinsic protein family signature 169 191 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu11g00241 239 PRINTS Major intrinsic protein family signature 52 76 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu11g00241 239 PRINTS Major intrinsic protein family signature 92 111 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu11g00241 239 Gene3D Glycerol uptake facilitator protein. 1 238 IPR023271 -
Lapu11g00241 239 PANTHER AQUAPORIN SIP1-1 1 238 IPR044222 GO:0015250
Lapu11g00241 239 Pfam Major intrinsic protein 3 226 IPR000425 GO:0015267|GO:0016020|GO:0055085
Lapu11g00241 239 SUPERFAMILY Aquaporin-like 3 233 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00241 Lapu-Chr11 5382774 5383739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00241 1 230 Major Intrinsic Protein MIP AT3G04090 44.783 3.38e-61 190
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00241 K09875 - gmx:100797126 408.297