Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00232 ATGGCCGCAGCAGCAACATCAGCAACAGCCACTCTTTCCAAACCTTCCTCTGTACCTTTCAATCACACCCACTCTTTCCCTAAAACACCTTCAATACTCCCCACTCTCCCTCGCTCCGCCGTCAAACCCCTCTTCCTCGTTTCCTCCAAAAACCCTCTTTCCGACCTTCTCTCCGTCCCAACCGCACAAGCCACCGCATGGGACGATGACGACGAGAAGCCACGCGAAGAGTGCGGCGTCGTCGGCATCTATGGCGACCCCGAGGCCTCCCGTCTCTGCTACCTCGCCCTCCATGCGCTCCAACACCGCGGCCAGGAAGGCGCCGGAATCGTAACCGTTCACAACAACGTCCTCCAATCCATCACCGGCGTTGGCCTCGTCTCCGACGTATTCAACCAGTCCAAACTCGACCAGCTCCCCGGCAGCCTCGCCATAGGCCATGTCCGCTACTCCACCGCCGGCCAATCCATGCTCAAAAACGTTCAGCCCTTCGTCGCTGGTTACCGATTCGGCTCCGTCGGCGTCGCCCACAACGGTAACCTCGTCAACTATGGCACCCTTCGCTCCAACCTCGAGGACTCCGGCTCCATCTTCAATACCACCTCCGACACCGAGGTCGTCCTCCACCTGATCGCCACCTCCAAGCACCGCCCCTTTATCCTCCGCATCGTCGACGCCTGCGAAAAGCTCCAGGGCGCTTACTCCATCGTCTTTGTCACCGAGGACAAACTCGTCGCCGTTCGCGACCCCTTCGGCTTCCGTCCCCTCGTCATGGGGAGGAGAAGCAACGGCGCTGTCGTCTTCGCCTCCGAAACCTGCGCCCTCGATTTGATCGAAGCCACTTACGAGAGAGAGGTTTTCCCCGGCGAGGTTCTTGTGGTGGATAAAAACGGTGTTCAGAGTCTATGCCTAATGTCTCATCCTCAACCCAAGCAATGCATTTTCGAGCATATCTACTTCGCGCTTCCCAATTCTGTTGTTTTCGGGAGGTCCGTGTACGAGTCTCGCAGGAGATTCGGGGAGATTTTAGCCTCTGAGAGTCCCGTGGATTGTGATGTTGTGATTGCTGTTCCTGATTCTGGGGTTGTGGCTGCGCTTGGGTATGCTGCAAAAGCTGGGGTTCCCTTTCAGCAGGGTTTGATTAGGTCACATTATGTTGGAAGGACATTCATTGAGCCCTCTCAGAAGATTAGGGACTTTGGTGTGAAACTCAAGCTCTCACCCGTGCGTGCTGTGCTTGAGGGTAAACGTGTGGTGGTTGTCGATGATTCCATTGTGAGAGGAACCACCTCATCCAAGATTGTTAGGTTGTTGAAGGAAGCTGGTGCCAAGGAGGTTCACATGAGGATTGCTAGTCCTCCCATTATTGGGTCTTGTTATTATGGGGTTGATACTCCCAGTTCAGAAGAGTTGATTTCTAATAGAATGAGTGTGGAAGAGATAAGGGACTTCATTGGGTCAGATTCGCTTGCCTTTTTACCCTTTGATAGCTTGAAGAAGTTGTTGGGGAGTGAGAGTCCTAATTTCTGCTATGCCTGTTTCTCTGGGAATTACCCTGTGGAGCCTACAGAGCTCAAGGTGAAGAGGGTTGGGGACTTCGTGGATGATGGCTTGAATGGGAGCTTGGAGTCTATTGGTGGTGGTTGGGTTCAAGCAAACCGAAACCAAATCAAGGTTGGTAGTTAG 1686 0.5391 MAAAATSATATLSKPSSVPFNHTHSFPKTPSILPTLPRSAVKPLFLVSSKNPLSDLLSVPTAQATAWDDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVTVHNNVLQSITGVGLVSDVFNQSKLDQLPGSLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYGTLRSNLEDSGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLQGAYSIVFVTEDKLVAVRDPFGFRPLVMGRRSNGAVVFASETCALDLIEATYEREVFPGEVLVVDKNGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRRFGEILASESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEEIRDFIGSDSLAFLPFDSLKKLLGSESPNFCYACFSGNYPVEPTELKVKRVGDFVDDGLNGSLESIGGGWVQANRNQIKVGS* 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00232 561 CDD GPATase_N 78 328 IPR035584 -
Lapu11g00232 561 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 78 297 IPR017932 -
Lapu11g00232 561 NCBIfam amidophosphoribosyltransferase 78 519 IPR005854 GO:0004044|GO:0009113
Lapu11g00232 561 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 76 525 - -
Lapu11g00232 561 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 78 301 IPR029055 -
Lapu11g00232 561 Hamap Amidophosphoribosyltransferase [purF]. 77 518 IPR005854 GO:0004044|GO:0009113
Lapu11g00232 561 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 78 519 IPR029055 -
Lapu11g00232 561 MobiDBLite consensus disorder prediction 1 24 - -
Lapu11g00232 561 CDD PRTases_typeI 340 451 IPR000836 -
Lapu11g00232 561 Pfam Phosphoribosyl transferase domain 352 447 IPR000836 -
Lapu11g00232 561 Gene3D - 337 501 IPR029057 -
Lapu11g00232 561 PIRSF Pur1 74 532 IPR005854 GO:0004044|GO:0009113
Lapu11g00232 561 Pfam Glutamine amidotransferase domain 156 275 IPR017932 -
Lapu11g00232 561 SUPERFAMILY PRTase-like 313 524 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00232 Lapu-Chr11 5237747 5240050 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00232 68 551 PRT Gene Family AT2G16570 86.214 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00232 K00764 - gmx:100801720 999.964