Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00226 ATGTTCCAGCCGAACCTGATGGAAGCTTTGGAGATGGGTCAGAACACTTCGGAGAGTGAGGTCCCTCGAATCCGTGAAGATGAGTTTGACAGTGCCACCAAGTCTGGTAGTGAAAACCATGAAGCCTCTGGTGAAGACCAAGACCCTCGTCCCAACAAAAAGAAGCGTTACCACCGCCACACCCAACACCAGATCCAAGAAATGGAAGCATTCTTCAAGGAGTGTCCACACCCAGATGACAAGCAAAGAAAAGAACTAAGTAGGGAATTAGGGTTAGAGCCATTACAGGTTAAGTTTTGGTTTCAGAACAAGCGTACCCAGATGAAGACACAACACGAGCGGCATGAGAATACACAGCTTAGAACCGAGAACGAGAAGCTTCGAGCAGATAACATGAGGTATAGGGAGGCTCTTAGCAATGCTTCGTGTCCTAATTGTGGTGGACCAACCGCTATAGGAGAAATGTCATTTGATGAACATCACTTGAGGCTTGAGAATGCAAGGCTAAGAGAAGAGATTGATAGGATTTCAGCAATTGCTGCCAAGTATGTAGGGAAGCCTGTGGTGAATTATTCAAATATTTCTCCTTCTCTCCCTCCTCGTCCTCTAGAACTTGGGGTTGGTGCTGGTTTTGGAGGCCAGCCAGGGATTGGTGTTGACATGTATGGAGCTGGGGATCTTCTGAGGTCAATTAGTGGACCCACTGAAGCTGATAAGCCGATAATAATAGAGCTAGCTGTTGCAGCTATGGAGGAACTCATTGGAATGGCACAAGTGGGTGATCCTCTTTGGTTAACTACCCTTGATGCCACTTCCACTATACTCAATGAGGATGAATACATCAGGTCCTTCCCTCGAGGAATTGGCCCAAAACCTACTGGCTTCAAATGTGAAGCTTCTAGAGAAACTGCTGTTGTTATCATGAACCATGTCAGCCTCGTTGAGATTCTCATGGATGTGAATCAATGGTCCACAGTGTTCTCTGGTATAGTCTCAAGAGCCATGACTCTGGAAGTGCTATCGACAGGGGTGGCCGGGAATTACAATGGTGCCTTACAAGTGATGACAGCAGAATTGCAACTACCTACACCTCTTGTGCCAACTCGAGAGAGTTATTTTGTAAGGTATTGTAAGCAACATTCCGATGGAACTTGGGCAGTGGTGGATGTATCTCTGGATAATTTGCGTCCAAGTCCTTCAGCCAGATGTAGAAGAAGGCCTTCTGGTTGCTTAATTCAAGAAATGCCAAATGGCTATTCAAAGGTCACATGGGTTGAGCATGTGGAAGTGGATGACAGAGGTGTTCATAATCTTTACAAACAGCTTGTTAGCTCTGGACATGCATTTGGTGCAAAACGTTGGGTTGCAACCTTAGATCGACAGTGTGAAAGACTCGCTAGTGCTATGGCAACGAACATTCCCACTGTTGACGTTGGTGTGATAACAAACCAAGAGGGGAGAAAGAGTATGATGAAACTGGCGGAAAGAATGGTGATAAGCTTTTGTGCTGGAGTGAGTGCTTCCACTGCTCACACATGGACAACACTGTCTGGAACTGGTGCTGATGATGTAAGAGTGATGACCCGAAAGAGCGTGGATGACCCTGGAAGACCCCCTGGCATCGTTCTCAGTGCTGCCACTTCTTTTTGGCTTCCAGTTCCACCTAAACGAGTTTTTGACTTTCTCCGTGACGAGAACTCTAGGAATGAGTGGGACATTCTTTCCAATGGCGGAGTTGTGCAAGAAATGGCACACATTGCAAATGGACGAGATACTGGAAACTGCGTGTCTCTACTTCGAGTAAATAGTGCAAATTCAAGCCAGAGCAACATGTTAATATTGCAAGAGAGTTGCACCGATACAACAGGGTCTTTTGTCATTTATGCTCCGGTGGATATTGTTGCAATGAATGTAGTTCTAAATGGAGGAGACCCAGATTATGTGGCACTTCTTCCTTCAGGGTTTGCAATTCTCCCAGATGGAACCATATCTCATGAAACTGGACCTGGTGGATCTCTTTTAACTGTTGCGTTTCAAATACTGGTTGATTCAGTTCCAACCGCTAAGCTTTCTCTTGGATCTGTTGCCACTGTCAACAATCTCATTGCATGCACTGTTGAGAGAATCAAGGCATCTTTGTCTGGTGAACCTGCTTGA 2157 0.458 MFQPNLMEALEMGQNTSESEVPRIREDEFDSATKSGSENHEASGEDQDPRPNKKKRYHRHTQHQIQEMEAFFKECPHPDDKQRKELSRELGLEPLQVKFWFQNKRTQMKTQHERHENTQLRTENEKLRADNMRYREALSNASCPNCGGPTAIGEMSFDEHHLRLENARLREEIDRISAIAAKYVGKPVVNYSNISPSLPPRPLELGVGAGFGGQPGIGVDMYGAGDLLRSISGPTEADKPIIIELAVAAMEELIGMAQVGDPLWLTTLDATSTILNEDEYIRSFPRGIGPKPTGFKCEASRETAVVIMNHVSLVEILMDVNQWSTVFSGIVSRAMTLEVLSTGVAGNYNGALQVMTAELQLPTPLVPTRESYFVRYCKQHSDGTWAVVDVSLDNLRPSPSARCRRRPSGCLIQEMPNGYSKVTWVEHVEVDDRGVHNLYKQLVSSGHAFGAKRWVATLDRQCERLASAMATNIPTVDVGVITNQEGRKSMMKLAERMVISFCAGVSASTAHTWTTLSGTGADDVRVMTRKSVDDPGRPPGIVLSAATSFWLPVPPKRVFDFLRDENSRNEWDILSNGGVVQEMAHIANGRDTGNCVSLLRVNSANSSQSNMLILQESCTDTTGSFVIYAPVDIVAMNVVLNGGDPDYVALLPSGFAILPDGTISHETGPGGSLLTVAFQILVDSVPTAKLSLGSVATVNNLIACTVERIKASLSGEPA* 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00226 718 ProSiteProfiles START domain profile. 235 467 IPR002913 GO:0008289
Lapu11g00226 718 SUPERFAMILY Bet v1-like 235 466 - -
Lapu11g00226 718 Coils Coil 117 137 - -
Lapu11g00226 718 SMART HOX_1 52 115 IPR001356 GO:0003677
Lapu11g00226 718 Gene3D - 292 461 IPR023393 -
Lapu11g00226 718 Gene3D - 39 128 - -
Lapu11g00226 718 ProSiteProfiles 'Homeobox' domain profile. 51 111 IPR001356 GO:0003677
Lapu11g00226 718 SUPERFAMILY Homeodomain-like 40 111 IPR009057 -
Lapu11g00226 718 CDD START_ArGLABRA2_like 239 463 - -
Lapu11g00226 718 FunFam Homeobox-leucine zipper protein HDG1 39 127 - -
Lapu11g00226 718 MobiDBLite consensus disorder prediction 20 52 - -
Lapu11g00226 718 Pfam START domain 245 464 IPR002913 GO:0008289
Lapu11g00226 718 ProSitePatterns 'Homeobox' domain signature. 86 109 IPR017970 GO:0000981|GO:0006355
Lapu11g00226 718 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 52 713 IPR042160 -
Lapu11g00226 718 SMART START_1 244 464 IPR002913 GO:0008289
Lapu11g00226 718 SUPERFAMILY Bet v1-like 483 710 - -
Lapu11g00226 718 Pfam Homeodomain 54 109 IPR001356 GO:0003677
Lapu11g00226 718 CDD homeodomain 54 112 IPR001356 GO:0003677
Lapu11g00226 718 FunFam Homeobox-leucine zipper protein GLABRA 2 244 463 - -
Lapu11g00226 718 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00226 Lapu-Chr11 5151663 5158466 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00226 1 718 Homeobox Transcription Factor Family AT1G05230 78.308 0.0 1164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lapu11g00226 START 1.1e-59 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00226 K09338 - gmx:100782260 1390.17