Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00217 ATGGTTGAGCGAAAGCAGTTCAAGACGAAGTTATGTGTTCTGTATCAGAGAGGTCGCTGCAATCGCCATAATTGCTCTTTCGCGCATGGGAGTGCCGAGCTTCGACGATTTCCTGCCTCGTATAGTGGGAGGAGAGACTATTTAGGTAATGACTTGAGGGATAAACTTGACAGAAGGCATTTATCTCCTCGAAGGTACTCACCAGCTCAAGATGCAAGAGGCCGCCAGAGTATCCGTGAATACAGTCCTCCAAGGTCTTTGGAGAATAAAAGTGACAGAAAACATAGGAGAAAACAGGGTAATACTGGTCAAAGTGATACTTCTGGAAATTTGAAAGTCCCAGATAGAGTTCAAGATCAAGTTAAAGAAAGAAAAATGCTTTCCTCTGCTTCTAGGAATACTCTTGAGGAGCAGCTGAAGAAAGTAGATTCAGGTATCAGTGCTCTACAGAACCGAAAATTCCAGCTAGAGGTCTACCTTGATGAGAGTATTCAAGAAGTGGATAGCCTTAATTCTAGAATTCAGGAGCTTGAAGCTCAATTATGCAAAGAGGATGAGGAGTGCAAAAGAATTACTTCAAGAATAAGGAAATTTGTTAGAGTCCACAATCATACGTCACAGTTACAAGATGAACTGAAGAGATCTCAAGTCCGACTTCAGCGGTTTGGAGATCAGCTTGTCTCAGACATTTCTAGAATTGGTGCCAATGAAGAAGATTTAAGCATTGATATTGTCAGCAATGGTGAAAATACTGGTCTTCTTCCAATTGTCAAACATAATGTGGAGCATAATGATGCATCATCCCACAGAAAAAGGCTGCACATTGAACGAGATGCTTTGGAAGATTTAAAACAAGATAGATCAAAGGATGGACATTTGGTTGAGAACGCCAGAACTAAGAAGCGATCTCGGTGGAATATATCAGATCAATTGAATGACGAGTCCCTTGGGGGCCCAGACGATGGAACTGAAGTTATTAGAGCACTAGATCTTGAAGGCAGGCACAAGAGAGGATTGAAGCAACCTAGGATTGAAGTGCCATCGACTAGCATGGCAGCTCATGTGGCTGATGAGGACGTTGATATTGAACTTTACAACGGAACTGATATTAATGAAACTGCAAATACGGAAAATGAGAATGGAGTGGCATATAAGGTGAAGGCTGCACCACTTATGCTTCCCCCAGCTTTGGTACCTCGTAGCAATTATTCGCAGTACGAGGGTAACGACGAGAATGTTGATGTGGATGGCTGA 1254 0.425 MVERKQFKTKLCVLYQRGRCNRHNCSFAHGSAELRRFPASYSGRRDYLGNDLRDKLDRRHLSPRRYSPAQDARGRQSIREYSPPRSLENKSDRKHRRKQGNTGQSDTSGNLKVPDRVQDQVKERKMLSSASRNTLEEQLKKVDSGISALQNRKFQLEVYLDESIQEVDSLNSRIQELEAQLCKEDEECKRITSRIRKFVRVHNHTSQLQDELKRSQVRLQRFGDQLVSDISRIGANEEDLSIDIVSNGENTGLLPIVKHNVEHNDASSHRKRLHIERDALEDLKQDRSKDGHLVENARTKKRSRWNISDQLNDESLGGPDDGTEVIRALDLEGRHKRGLKQPRIEVPSTSMAAHVADEDVDIELYNGTDINETANTENENGVAYKVKAAPLMLPPALVPRSNYSQYEGNDENVDVDG* 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00217 417 MobiDBLite consensus disorder prediction 85 101 - -
Lapu11g00217 417 Coils Coil 160 180 - -
Lapu11g00217 417 ProSiteProfiles Zinc finger C3H1-type profile. 6 32 IPR000571 GO:0046872
Lapu11g00217 417 Coils Coil 132 152 - -
Lapu11g00217 417 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 40 1 416 IPR045868 GO:0046872
Lapu11g00217 417 MobiDBLite consensus disorder prediction 54 118 - -
Lapu11g00217 417 Gene3D - 1 36 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Lapu11g00217 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00217 - - gmx:100811131 723.776
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00217 11 4973308 4981902 Lapu11g00217 11 4973308 4981902 ECH