Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00216 ATGTGCAAAGGCGTGGAAGAAAAAAAGCGTGGTGCTTCATGCAGGAGCTTCCCTCCTGAAGAGAATTCTTCATTTGCTGCAACAAGTGATTGTTCAACATCTTGTGAGCTGTGTGGTTTGCAGGCTTCATTGTATTGTCCAGCGGATAATGCGTATTTGTGCAGAAAATGTGATAAATGGGTTCACAGAGCCAATTTTTTGGCCCTTAGACATGTGAGGTGCTTTTTGTGCAACACATGTCAGAACCTTACACAGAGATATCTGATTGGAATCTCAACAGAGATCCATCTTCCAGTAAGATGGACTGTGCAGAAACAGAACCTTCCTAACAACACTGCCGATGGATTTTGTTCAAGAACGATTAACACACCTTTCATCTTTCTCTAG 387 0.4238 MCKGVEEKKRGASCRSFPPEENSSFAATSDCSTSCELCGLQASLYCPADNAYLCRKCDKWVHRANFLALRHVRCFLCNTCQNLTQRYLIGISTEIHLPVRWTVQKQNLPNNTADGFCSRTINTPFIFL* 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00216 128 CDD Bbox1_BBX-like 35 76 - -
Lapu11g00216 128 SMART bboxneu5 30 76 IPR000315 GO:0008270
Lapu11g00216 128 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 34 84 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00216 Lapu-Chr11 4958953 4959561 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00216 1 128 C2C2-CO-like Transcription Factor Family AT3G21890 42.105 1.66e-25 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00216 - - gmx:100305571 147.902