Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00210 ATGGAGTCTTTATTTGGCTGCACCAACCAGAACACGCATGATCGCAGAAAAGATTCACCATCTTTAGATAATGCACCGCAATATATTAAGATTATTGACCCTAGGAAAGCACAGAACTTATCAATTCTTTTGCGAGCTCTGAATGTGACAACAGAAGAAGTTGTCGATGCTCTTGTAGAAGGTAACGAGATTCCCATGGAGCTCATCCAGACGTTGTTGAAGATGGCACCTACACAAGATGAGGAAATGAAGCTAAGGCTATTCAATGGAGAACTGCATGAACTAGGCCCGGCAGAGAGGTTCCTCAAAGTGTTGGTTGACATTCCATTCGCTTTCAAACGTCTTGAATGTCTGATGTTCATGCATAACCTTCAAGAAGATTTCTCAAGCATTAAGGAATCCTTTGCCACATTAGAGGTGGCTTGCAACGATCTGAGAAAAAGCAGGCTATTCCTGAAACTCCTAGAGGCAGTTCTGAAAACCGGCAACCGCATGAATGACGGAACTTACCGCGGCGGCGCGCAAGCCTTCAGGCTCGACACCCTCCTCAAACTCTCCGACGTCAAGGGAACAGACGGCAAGACCACACTGCTGCACTTCGTCGTCGAGGAGATCATCCGCTCCGAGGGAATCCGCGCCGCGCGCACCGAAAGAGCAAGCCGGAGTATCACCAGCGTCAACACCAGCGACGACTCCGACGAGGGCGGCGAGGAGTCCGAGGAGCACTACCGCAGGATCGGCCTCCAGGTGGTGTCGAGCCTCGGCGAGGAACTCGCGGACGTTAAGAAGGCGGCGCTGATAGACGGCGACGCGCTCACCTCGTCGGTGTCGAAGCTGGGGCACTCGTTGGTGAAGACGCAGGATTTTCTGAACACGGACATGAAGCACCTGGACGAAGAGAGCGAGTTCCAGCGCAGCATGGAGCGGTTCATGGAGAGCGCGAGGAAGGAGGTGATGTGGATGGTGGAGGAGGAGAAGAGGATAATGGCGCTTGTTAAGAGCACTGCCGATTACTTTCACGGCAATGCCGGCAAGGACGAAGGGTTGCGTTTGTTCTTGATCGTGCGTGATTTCTTGATCATATTGGACAAGGTTTGCAGAGAAGTGAGGGACGCGACCATGAAGCTGCCCAAGGCTTCCAGCAGTATCAAGAAGGAGCCTAGAACTTCTTCTGCTTCTTCCCCTGATGCCCGCAGTCAACAATCTCCAACTCCACCCTCTGATCTCCGTAGAAAGCTCTTCCCTGCCATTGCTGAAAGGAGAATGGATTACTCTAGCTCTGATAGCTCCGACGATGAGGACTTCTAA 1308 0.5191 MESLFGCTNQNTHDRRKDSPSLDNAPQYIKIIDPRKAQNLSILLRALNVTTEEVVDALVEGNEIPMELIQTLLKMAPTQDEEMKLRLFNGELHELGPAERFLKVLVDIPFAFKRLECLMFMHNLQEDFSSIKESFATLEVACNDLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFRLDTLLKLSDVKGTDGKTTLLHFVVEEIIRSEGIRAARTERASRSITSVNTSDDSDEGGEESEEHYRRIGLQVVSSLGEELADVKKAALIDGDALTSSVSKLGHSLVKTQDFLNTDMKHLDEESEFQRSMERFMESARKEVMWMVEEEKRIMALVKSTADYFHGNAGKDEGLRLFLIVRDFLIILDKVCREVRDATMKLPKASSSIKKEPRTSSASSPDARSQQSPTPPSDLRRKLFPAIAERRMDYSSSDSSDDEDF* 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00210 435 Gene3D Formin, FH2 domain 1 402 IPR042201 -
Lapu11g00210 435 MobiDBLite consensus disorder prediction 377 412 - -
Lapu11g00210 435 ProSiteProfiles Formin homology-2 (FH2) domain profile. 1 388 IPR015425 -
Lapu11g00210 435 Pfam Formin Homology 2 Domain 1 362 IPR015425 -
Lapu11g00210 435 MobiDBLite consensus disorder prediction 1 22 - -
Lapu11g00210 435 SUPERFAMILY Formin homology 2 domain (FH2 domain) 26 374 - -
Lapu11g00210 435 PANTHER FORMIN-RELATED 1 427 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lapu11g00210 435 MobiDBLite consensus disorder prediction 383 407 - -
Lapu11g00210 435 SMART it6_source 1 377 IPR015425 -
Lapu11g00210 435 MobiDBLite consensus disorder prediction 217 242 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00210 Lapu-Chr11 4834587 4836542 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00210 1 423 FH2 protein (formin) Gene Family AT5G54650 63.380 1.00e-173 508
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00210 - - vum:124822826 681.019