Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00209 ATGGAATTGACAAGACCCAGTTATGCTGTTGTTTATGTCATTCTCCTTTGTGCGTTGGCCCAAGGGGGCTCAGAGGGGAAAGGGGGAAAGGAAGACGGTGGAGCGGCATCATACATTTATGTTAATAGAATAAAGGTAGAAAATGAGTGGAAACAGTGCAGGAAACAATTGATAGAGAGGAACAATGACTTGCATCCCCTGGAAGGGAGTGGTGGCATAAACACTATAAAAAGTAACATAGATAGAGAAACTAATTCTCTGCCCCTTCATATGAAAAGAAAAACTTTGGACTGCAAAAGAACTAGTACTAGTCCTGTTTCAGTAAAGGGTAGCTCTAGATATTTGTCAACAGAGCATTCTGGATCAACCTTGGGTGTGGAAAGTGGTCATGGAAGAAACTTGCTTGCTGATTCACCAAAAAAGCAGACGGCACCAAGTCCTTCTCCTACACCAGTCAGTTCTCCATTATCACCAAGTCATGGTCCAACACCAGCCAGTTCTCCATTATCACCAAAACCAGCAAGTTCTCCATTATCACCAAAACCAGCAAGTTCTCCACCACCACCACCACCATCACCAACTCCAACTCCCAAGAGTAAGGATTTACCACTCCCTCCAGATATGTTCGTACCATTTCCACCTCCACCCCCTGTCGCTCGTCCTTCTCCCAAAAATTCTCGACCTGTAGTACAAACTCCAGTTCCTTCACCATCTAGCAATGATGACAAAAAGAAGCAAACAATTATTTTAGCTTCCGCTTTATCAGGTGTTGTAATCTTGATAGGCTTGGCCCTCTGCTATTGTGAGGCCAGAAGAAACAAAGGTGATAGAGATGACAGGCCTTTGCTCGTATTAACCTCAAACGATTATCCTGGCGGTTCAAAGAAGGTTGTTCAATTGGGAGATTCTAACAGGGAAGAATATGACATTGGCAATGCAAAAAACCCTTCTAATGTTAGAAATTTTTCCACTAGGAAGGGTGGAAATGTCAATGTCCCAATGGTTGACACAGCATCAACATCATCAGAAGGCGTACAAAAAGTAGCAATGCCTCCTAGTGTAAAGCCTACCCCTCCACCGCCTACCCCTCCACTGCCTACCCCTCCACCGCCTACTCCGCCTCCGCCTCCTGCTGGACCACCACCACCTCCTCCGAAGCAGCCGCCTCCCGCTCCTCGTGCACCGCCGCCTCCAAAAAGTGCTCATCCTCCACCAGCTCCTCCGAAACCAATGGCAGGTAAGAATCAAGGATCAGTACTTCCTACAGAAGGAAGTTCAAATGAGGGAGATGCTCCAAAACCAAAACTAAAGCCATTTTTCTGGGATAAAGTTAATGCAAAACCTGGCCAAACTATGGTGTGGCATGAGATCAGTTCAGGATCGTTCGTGTAA 1392 0.4598 MELTRPSYAVVYVILLCALAQGGSEGKGGKEDGGAASYIYVNRIKVENEWKQCRKQLIERNNDLHPLEGSGGINTIKSNIDRETNSLPLHMKRKTLDCKRTSTSPVSVKGSSRYLSTEHSGSTLGVESGHGRNLLADSPKKQTAPSPSPTPVSSPLSPSHGPTPASSPLSPKPASSPLSPKPASSPPPPPPSPTPTPKSKDLPLPPDMFVPFPPPPPVARPSPKNSRPVVQTPVPSPSSNDDKKKQTIILASALSGVVILIGLALCYCEARRNKGDRDDRPLLVLTSNDYPGGSKKVVQLGDSNREEYDIGNAKNPSNVRNFSTRKGGNVNVPMVDTASTSSEGVQKVAMPPSVKPTPPPPTPPLPTPPPPTPPPPPAGPPPPPPKQPPPAPRAPPPPKSAHPPPAPPKPMAGKNQGSVLPTEGSSNEGDAPKPKLKPFFWDKVNAKPGQTMVWHEISSGSFV* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00209 463 PANTHER FORMIN-RELATED 235 462 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lapu11g00209 463 MobiDBLite consensus disorder prediction 352 411 - -
Lapu11g00209 463 MobiDBLite consensus disorder prediction 144 223 - -
Lapu11g00209 463 MobiDBLite consensus disorder prediction 100 127 - -
Lapu11g00209 463 MobiDBLite consensus disorder prediction 273 438 - -
Lapu11g00209 463 MobiDBLite consensus disorder prediction 225 244 - -
Lapu11g00209 463 MobiDBLite consensus disorder prediction 99 244 - -
Lapu11g00209 463 MobiDBLite consensus disorder prediction 310 347 - -
Lapu11g00209 463 ProSiteProfiles Formin homology-2 (FH2) domain profile. 426 463 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00209 Lapu-Chr11 4831663 4834464 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00209 178 462 FH2 protein (formin) Gene Family AT4G15200 35.783 4.86e-12 65.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00209 - - vra:106780023 367.466