Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00200 ATGGTAAACACCAAGAGAGAGGCCAGAAGGATAGTTATCCTTAACTGGTTCTACAGTTACATGCTGTCTATCTTCCTCTTCTGCTCATTGTTTTTCACTTTTAGTTTCAAGCATTGCTCAGCCGCAGATGCTATGACCATTAACAACTTATTGCAAGATGGGGAGGGGGATACTCTAATTTCAAAAGGTGAAAAGTTTGAGCTAGGATTTTTCACTCCTAATGGCAGCTCTAGTGGGAGAAGATATGTGGGAATATGGTACTACAAGTTGACTCCTCTAACAGTTGTGTGGGTTGCTAACCGAGATAACCCACTTCTAGATTCTAGGGGTGCTTTTGGCATTGTAGAAGATGGGAATCTAAAGGTTTTGGACAGAAGTGGGAAAGCCTACTGGGGCACAAAGCTTGAAGGATCAGCTTCACAACATAGAGCAGTGAAGATAATGGACAGTGGGAACCTTGTTGTTAGTGATGAAGTTGAAGACCAAGGTGATTATCAAGTGAAGATTTTGTGGCAGAGTTTTGCTAATCCAACAGATACATTCCTTCCTGGAATGAAGATGGAAGACAATTTAGAACTAACATCATGGAGAAGTTATGAAGACCCTGCACCAGGGAACTTCACTTTTGTGCATTGTGAAGGGGAGAACCAGTACGTTATATGGAAGAGGTCCATCAAGTATTGGAAAAGCAGTGTTTCAAGTAGGTTTGTTGGAACTGATGAGATGTCTCCAGCAATATCTTACTTGTTGTCAAATTTCACCTTGAGAGTATCCCCAAACGACTCTGTTCCCTTTCTCACTTCAGCACTTTATAGTGACACAAGGTTGGTCATGACTCACTGGGGTCAACTTAAGTACATGAAGATGGATTCAGAGAAAGTATGGTTGTTGGTTTGGGTGGAGCCAAGAGATAGATGCAGTGTGTTCAATGCCTGTGGAAACTTTGGAAGTTGTAATAGCAAGTATGACTCCATGTGTAAGTGTTTGCCAGGGTACAAGCCATATTCTGTTGAGAGTTGGAATGCTGGAGACTTTTCAGGTGGATGCAGCAGGAAAGCAAATGTCTGCAGTGGGGATGCTAAGAGAGCTACATTTTTGAGTTTGAAAATGATGAAAGTAGGGAACCCGGATGCGCAATTTAATGCCAAGAATGAAGAGGAATGCAAATCAGAGTGCCTCAACAATTGCCAGTGCCGTGCATATTCATATGAAGACACTAAAAAGCATGCAGTTTGCTGGATTTGGTATGAGGAGTTGAACAGTCTTGAAGAAGAGTACCAGGATGGTTGTGACCTGCATGTTCGCGTGGCATTTTCTGATATAGAATCCACTGGGAACAGTTGTGGAACTTGTGGTACAAATTTCATTCCATATCCTCTAAGCACAGGACCAAGTTGTGGTGACCCCATGTACTTCAGTTTTCTATGCAACAACACCTCTGGTGAGCTTGATTTTGAAACTCCTGGGGGAACCTATCAAGTGATTAGCATAAACCCGGACACACGAAAATTCATGATCCACAGAAAAGATGTACTTAACTGTGATCAGGGGACAAGGGATAAGTTTCTGTCTCTCAACAAGTCATTTCCATTTCACCTTACTGGCAATTGTCATGCTGATCCAAGTATTTTTAGTTCTAATGATCCCATGAAACATGGAGTAGAAATAGAATTCAGTTGGGATTCCCCATTAGAGCCTATTTGCTCTTCGTTGTTGGACTGCAAGGATTGGCCAAATTCAACTTGCAACACTACCAGCGATGGCAAGAAGAGATGTCTTTGCCACACAAACTTTATTTGGGATGGATTGAATTTAAACTGCACTCTAGAAGGCAATAATATCTATCAATCAGAAAGGAAACTTTCCTTACCTAAGATCATTGTAACTACTTTTACAACTGTGATTGGTTTAATTCTTCTGTCAACTACTGTTACATGTGTTTACTTGAGGAAAAGGAGACAGAGCACACAACAAGATAGCAGGGGATATGTCCAAAAAAACTCAGGGATTAATTTGTATGACAGTGAAAGATATGTCAGAGACTTGATTGAGTCTGGTAGGTTCAAAGAAGATGATGCACAGGTCATAGATATTCCATTTTTCCATTTAGAAAGCATACTTGGTGCCACTAACAATTTTGCAAATGCAAACAAGCTTGGACAAGGAGGGTTTGGTCCAGTCTACAAGGGAAAATTTCCTGGAGGACAAGAAATAGCAGTAAAGAGACTCTCAAGTTGTTCTGGACAAGACCAGAAGCTGTGTGTTCTATTAGACTGGGATATGCGCTTCAAGATTATTTTGGGGATTGCTCGAGGGCTCCTTTACTTGCATGAAGATTCTAGGTTGAGGATTATTCACAGGGACTTGAAAACAAGTAACATTCTACTAGATGAAGAGAAGAATCCTAAAATCTCAGACTTTGGCTTAGCCAGGATATTTGGAGGAAAAGAGACAGTAGCTAACACAGATAGAGTGGTTGGAACATATGGATATATGTCTCCAGAGTATGCACTTGATGGACACTTTTCAGTGAAGTCTGATGTCTTTAGCTTTGGTGTGGTGGTACTTGAGATTATCAGTGGAAAAAGGAACACAGGATTTTATCAACCAGAACATAAATTGAGTCTTCTAGGATATGCATGGCTTTTGTGGAAAGAAGGAAGGGAATTGGAATTCATGGACCAAACGCTAAGTCAAACATGCAAAGCAGATGAATGCTTGAAATGTGTGAATGTGGGGCTCTTGTGCTTACAAGAAGATCCAAATGAACGTCCCACAATGTCAAATGTGGTTTTCATGCTTGGTAGTGAATCCAACACTCTTCCAAGTCCTAAGGAACCAGCATTTGTTATAAGGAGATGCCCTTCAAGTAGAGCATCTACTTCAAGTAAACTTGAAACCTTTTCACGTAATGAATTGACAGTAACTATAGAACATGGCAGGTAG 2946 0.4087 MVNTKREARRIVILNWFYSYMLSIFLFCSLFFTFSFKHCSAADAMTINNLLQDGEGDTLISKGEKFELGFFTPNGSSSGRRYVGIWYYKLTPLTVVWVANRDNPLLDSRGAFGIVEDGNLKVLDRSGKAYWGTKLEGSASQHRAVKIMDSGNLVVSDEVEDQGDYQVKILWQSFANPTDTFLPGMKMEDNLELTSWRSYEDPAPGNFTFVHCEGENQYVIWKRSIKYWKSSVSSRFVGTDEMSPAISYLLSNFTLRVSPNDSVPFLTSALYSDTRLVMTHWGQLKYMKMDSEKVWLLVWVEPRDRCSVFNACGNFGSCNSKYDSMCKCLPGYKPYSVESWNAGDFSGGCSRKANVCSGDAKRATFLSLKMMKVGNPDAQFNAKNEEECKSECLNNCQCRAYSYEDTKKHAVCWIWYEELNSLEEEYQDGCDLHVRVAFSDIESTGNSCGTCGTNFIPYPLSTGPSCGDPMYFSFLCNNTSGELDFETPGGTYQVISINPDTRKFMIHRKDVLNCDQGTRDKFLSLNKSFPFHLTGNCHADPSIFSSNDPMKHGVEIEFSWDSPLEPICSSLLDCKDWPNSTCNTTSDGKKRCLCHTNFIWDGLNLNCTLEGNNIYQSERKLSLPKIIVTTFTTVIGLILLSTTVTCVYLRKRRQSTQQDSRGYVQKNSGINLYDSERYVRDLIESGRFKEDDAQVIDIPFFHLESILGATNNFANANKLGQGGFGPVYKGKFPGGQEIAVKRLSSCSGQDQKLCVLLDWDMRFKIILGIARGLLYLHEDSRLRIIHRDLKTSNILLDEEKNPKISDFGLARIFGGKETVANTDRVVGTYGYMSPEYALDGHFSVKSDVFSFGVVVLEIISGKRNTGFYQPEHKLSLLGYAWLLWKEGRELEFMDQTLSQTCKADECLKCVNVGLLCLQEDPNERPTMSNVVFMLGSESNTLPSPKEPAFVIRRCPSSRASTSSKLETFSRNELTVTIEHGR* 982
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00200 981 Pfam PAN-like domain 361 421 IPR003609 -
Lapu11g00200 981 ProSitePatterns Serine/Threonine protein kinases active-site signature. 784 796 IPR008271 GO:0004672|GO:0006468
Lapu11g00200 981 SUPERFAMILY Protein kinase-like (PK-like) 697 963 IPR011009 -
Lapu11g00200 981 CDD B_lectin 48 177 IPR001480 -
Lapu11g00200 981 Pfam D-mannose binding lectin 94 191 IPR001480 -
Lapu11g00200 981 SUPERFAMILY Hairpin loop containing domain-like 371 423 - -
Lapu11g00200 981 Pfam Domain of unknown function (DUF3403) 936 981 IPR021820 GO:0004674
Lapu11g00200 981 Gene3D Transferase(Phosphotransferase) domain 1 699 749 - -
Lapu11g00200 981 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 37 174 - -
Lapu11g00200 981 SMART serkin_6 713 933 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00200 981 Pfam S-locus glycoprotein domain 233 335 IPR000858 GO:0048544
Lapu11g00200 981 SMART blect_4 48 177 IPR001480 -
Lapu11g00200 981 Gene3D Transferase(Phosphotransferase) domain 1 750 949 - -
Lapu11g00200 981 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 742 942 - -
Lapu11g00200 981 Pfam Protein kinase domain 764 931 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00200 981 CDD PAN_AP_plant 356 437 - -
Lapu11g00200 981 ProSiteProfiles Protein kinase domain profile. 650 949 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00200 981 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 25 924 - -
Lapu11g00200 981 ProSiteProfiles Bulb-type lectin domain profile. 44 168 IPR001480 -
Lapu11g00200 981 Gene3D - 38 175 IPR036426 -
Lapu11g00200 981 ProSiteProfiles EGF-like domain profile. 302 338 IPR000742 -
Lapu11g00200 981 ProSiteProfiles PAN/Apple domain profile. 356 430 IPR003609 -
Lapu11g00200 981 SUPERFAMILY alpha-D-mannose-specific plant lectins 95 201 IPR036426 -
Lapu11g00200 981 SMART ntp_6 360 436 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00200 Lapu-Chr11 4737090 4742376 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00200 701 976 Receptor kinase-like Gene Family AT4G23280 52.632 4.90e-91 301
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lapu11g00200 Pkinase 8.3e-28 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00200 - - var:108339799 1831.22