Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00193 ATGAATTATTTAAGGCCAGACATCAAAAGAGGGAACTACACTTACGAAGAAGAAGAGACAATTATCAAACTGCATGCAAGTCTTGGAAATAGGTGGTCTGTGATTGCCTCTCATTTACCTGGAAGATCAGATAACGATATAAAAAATCACTGGCATGCACATCTTAAGAAGCGCTTTCAATACAATTCAGAAACAAATGAAAAAGCTGAAGCTTCCACTCCAAAACACCACTTCCTAGTTGAATCCATTCCAGAGGAATCTGTGGAAGTTGCTGCAAGCAGTTTCCAGAACAGTTCCCTTGCTACTTCCCAAACTCCTGACGGTGATTCTCCATCGTCCCAGCACACATCATTGAGAGATGTTTTGTGCATGATAACTGAACCTGCACCAGCCAGTAACGAGAATTTGGCTATTGATGACTTTGCTGATTTTATGGAGGAAAACACAGATCCTATAAGTGCATATTCTTGGAAAGAACTTTATGAAATTTCGTACTTAGACGAATTTCTTGCTCCTTTTGTGACTGAACCTGAAAGTTTTTGTCCAGTTTATGATGTCTGGGGGCTGTTCGAATAG 576 0.401 MNYLRPDIKRGNYTYEEEETIIKLHASLGNRWSVIASHLPGRSDNDIKNHWHAHLKKRFQYNSETNEKAEASTPKHHFLVESIPEESVEVAASSFQNSSLATSQTPDGDSPSSQHTSLRDVLCMITEPAPASNENLAIDDFADFMEENTDPISAYSWKELYEISYLDEFLAPFVTEPESFCPVYDVWGLFE* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00193 191 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 114 - -
Lapu11g00193 191 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 5 59 IPR017930 -
Lapu11g00193 191 MobiDBLite consensus disorder prediction 94 116 - -
Lapu11g00193 191 SUPERFAMILY Homeodomain-like 1 63 IPR009057 -
Lapu11g00193 191 CDD SANT 12 55 IPR001005 -
Lapu11g00193 191 ProSiteProfiles Myb-like domain profile. 5 55 IPR001005 -
Lapu11g00193 191 SMART sant 9 57 IPR001005 -
Lapu11g00193 191 Pfam Myb-like DNA-binding domain 10 54 IPR001005 -
Lapu11g00193 191 Gene3D - 12 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00193 Lapu-Chr11 4646434 4648024 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00193 1 124 MYB Transcription Factor Family AT3G23250 46.875 8.36e-31 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lapu11g00193 Myb_DNA-binding 1.2e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00193 K09422 - gmx:106799185 261.922