Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00192 ATGATGGTGAGAACCCCTAGCTGTGACAAAAATGGACTGAAGAAAGGAACATGGACACCTGAGGAAGACAAGAAGTTGGTTGATTATATTACTAGATACGGCCACTGGAATTGGCGCCTGCTCCCCAAGTTCGCAGGTCTTGCGAGATGTGGAAAGAGTTGCAGACTTCGGTGGTTGAATTACCTAAGGCCAAACCTCAAAAGAGGAAACTATACTGAAGAAGAGGAGGAAACTATCATCAAGCTGCACGGACATCTCGGAAACAGATGGTCTGCTATTGCTGCAAGGATTCCAGGAAGAACAGACAATGAAATAAAAAACTATTGGCACACCAACCTCAAGAAACGGTCTCAAGAAGATTCAGCCGCAGAATCTCAAGTCTCAGACTCATGTGAGCAATCCCCAGAAACAACAACTGGAGCAAGTGCTAATACTTTCCATAACTTTGACTCCACGCAAGATTGTTCCCCATTTTTGCAGCATTCATCGTCCACCACAACAAACACAGAGTGTAACACTGTCACCATCAACCAAAATCTGGTTCTGCAAGATGAATTCGCCTTTTGGGACGCTGACACTGATCTTGTGAGTGGCAATTTCTGGTTAGAATCGTACATGCATGATATTTCATACGTATCTAGTGAACCTGAGTACTTTAGCAGCACAGTTGTTGATGCAGAACTTTGGAGCTATGATAACTGA 702 0.4387 MMVRTPSCDKNGLKKGTWTPEEDKKLVDYITRYGHWNWRLLPKFAGLARCGKSCRLRWLNYLRPNLKRGNYTEEEEETIIKLHGHLGNRWSAIAARIPGRTDNEIKNYWHTNLKKRSQEDSAAESQVSDSCEQSPETTTGASANTFHNFDSTQDCSPFLQHSSSTTTNTECNTVTINQNLVLQDEFAFWDADTDLVSGNFWLESYMHDISYVSSEPEYFSSTVVDAELWSYDN* 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00192 233 MobiDBLite consensus disorder prediction 123 145 - -
Lapu11g00192 233 SUPERFAMILY Homeodomain-like 12 109 IPR009057 -
Lapu11g00192 233 Gene3D - 14 67 - -
Lapu11g00192 233 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 198 - -
Lapu11g00192 233 SMART sant 14 64 IPR001005 -
Lapu11g00192 233 SMART sant 67 115 IPR001005 -
Lapu11g00192 233 ProSiteProfiles Myb-like domain profile. 63 113 IPR001005 -
Lapu11g00192 233 FunFam MYB-related transcription factor 14 67 - -
Lapu11g00192 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 62 IPR017930 -
Lapu11g00192 233 Pfam Myb-like DNA-binding domain 15 62 IPR001005 -
Lapu11g00192 233 Pfam Myb-like DNA-binding domain 68 113 IPR001005 -
Lapu11g00192 233 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 63 117 IPR017930 -
Lapu11g00192 233 Gene3D - 70 139 - -
Lapu11g00192 233 ProSiteProfiles Myb-like domain profile. 10 62 IPR001005 -
Lapu11g00192 233 CDD SANT 17 62 IPR001005 -
Lapu11g00192 233 MobiDBLite consensus disorder prediction 116 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00192 Lapu-Chr11 4604270 4606795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00192 2 116 MYB Transcription Factor Family AT2G31180 72.174 9.68e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu11g00192 Myb_DNA-binding 9.3e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00192 K09422 - gmx:100778518 365.925