Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00191 ATGGTGAGAACCCCCTCTTGTGACAAAAGTGGACTGAGGAAGGGTACATGGACTCCCGAGGAAGATACGAAATTAGTTGCTTACGTCACTAGGTATGGATGCTGGAATTGGCGCCAACTTCCCAAGTTTGCAGGTCTTGCAAGGTGTGGGAAAAGTTGTAGATTGAGATGGATGAACTATCTAAGGCCTAACCTCAAAAGAGGGAACTTCACTCCACAAGAAGAAGAATGCATAATCAGAATGCTCAAAAAACTTGGTAACAGATGGTCTGCTATTGCCGCTGAGTTACCTGGAAGAACAGATAACGAAATAAAAAATCATTGGCACACCACACTCAAGAAAAGGTCTCAACAAAACACAGTCACAAATGAAGAAGCCAGAGCCTTCAAATCAAAGAATAAAGAATCCAAGGCAGGGAGGGACTCGGTTCCCAACAAAAATGGTGTTACTGTTACTCTTCCACCTTCTACCGAGATTTCAGATAATTCGTCAGGCTCATTCTCGCCAGTTTCATCCTCCAGCAGCGAGTTTTCCTCCATAACTTCAGATCATTCCACTGCTGCTAGTATGGAAAATTTGGTGTTTGAAGATGACTTCGGTTTTCTGGATTCATATGTGAATGAAAGTTTCTGGAAAGAACTCAATCTGGACGGCGTTTCCTACGGTGCACCTTGTGAAGTAGTGTCAAGAGATAATAATGGCACTTTTCAAATTACAAATTCTACACAGATAGTTGATTCCTATGCATTATCTCCTCAACAATCATCCAGTGAAAGTATGGTTGTGGACAATGACTTTGGCAGCTTTCTGGATGCATACGGAGAGGCAACAGTTGATAACTTTTGGTCACAGCCATATGTGGCTGACGTGTCCCACGTTCCAAGCGAGCTACTTGTTCCCTCTGTGGCAGAATCTGAATATTTTTCTCCAATATATGATGATTTATGGGGTCAAAGTCACTTTGTACAATGA 972 0.4239 MVRTPSCDKSGLRKGTWTPEEDTKLVAYVTRYGCWNWRQLPKFAGLARCGKSCRLRWMNYLRPNLKRGNFTPQEEECIIRMLKKLGNRWSAIAAELPGRTDNEIKNHWHTTLKKRSQQNTVTNEEARAFKSKNKESKAGRDSVPNKNGVTVTLPPSTEISDNSSGSFSPVSSSSSEFSSITSDHSTAASMENLVFEDDFGFLDSYVNESFWKELNLDGVSYGAPCEVVSRDNNGTFQITNSTQIVDSYALSPQQSSSESMVVDNDFGSFLDAYGEATVDNFWSQPYVADVSHVPSELLVPSVAESEYFSPIYDDLWGQSHFVQ* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00191 323 FunFam MYB-related transcription factor 13 66 - -
Lapu11g00191 323 SMART sant 13 63 IPR001005 -
Lapu11g00191 323 SMART sant 66 114 IPR001005 -
Lapu11g00191 323 CDD SANT 69 112 IPR001005 -
Lapu11g00191 323 Gene3D - 68 142 - -
Lapu11g00191 323 CDD SANT 16 61 IPR001005 -
Lapu11g00191 323 MobiDBLite consensus disorder prediction 143 172 - -
Lapu11g00191 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lapu11g00191 323 MobiDBLite consensus disorder prediction 112 172 - -
Lapu11g00191 323 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lapu11g00191 323 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lapu11g00191 323 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lapu11g00191 323 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lapu11g00191 323 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lapu11g00191 323 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 226 - -
Lapu11g00191 323 FunFam Transcription factor MYB14 69 142 - -
Lapu11g00191 323 MobiDBLite consensus disorder prediction 127 141 - -
Lapu11g00191 323 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lapu11g00191 323 Gene3D - 14 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00191 Lapu-Chr11 4563202 4564453 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00191 1 214 MYB Transcription Factor Family AT2G31180 46.759 7.35e-59 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lapu11g00191 Myb_DNA-binding 1.2e-12 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00191 K09422 - gmx:100777107 466.463