Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00187 ATGGAGTTTGACCTTGAAAACCCTTTGGAAAATCTTCACTCCGATGCTGTCTCTTATCTCTTCCTCATTGAATCTGATCACACCCCATCACAAAATCATTCTCACACTCTCAAGGCCAGAGATCTTGACATCTCTGTCAGAAGAGAACTTGTTTCCTTAATCTCACAGTTGTCCTGCACTTTGGATCCAGCTTTGTCTTATCTTGCTACCAACTATCTGGATCGGTTCCTAGCCAGCCAAGGGATTTCGCAACCAAAGCCATGGGCCCTCAGGCTCATTGCTGTCTCTTGCATTTCTCTAGCTGTCAAGATGATGAGAACTGAATGCCCTGATGTCCAGGCTCTTATGAATCAAAATGATGGGGGCATGATCTTTGAGACGCAAACAATACTAAGAATGGAAGCACTTATCTTGGGAGCGTTGAAGTGGAGAATGCGGTCGATCACCCCATTCTCTTTCATACCTTTTTTCATTGCCTTGATGGGGCTCAAAGGCTCACCAATGGGGACGGTTCTGAGAAACCGTGCCTCTGAAATCGTATTCATGTCACAAAGAGAGATAAGGCTTTGGGAGTTCAAGCCATCTATAATTGCTGCATCTGCCCTTTTGTGTGCTTCTCATGAGTTGTTTCCTTTTCAATATCCGTCCTTCTTAAAAGCAATATCTGATTCTTCATATGTAAATGTAAATAAAGAAAGCGTGGAGCAGTGCTACAAAGTGATACAAGACATAGCCATAGAGGAGGAGTACGAGTCTGCGTTGAATGGGGTTTCAAGGTCAGACACACCGATCAATGTCTTGGACCATTTTCTCAGTTCAGAAAGTGAAAAAACCAACGGAATCACCGTTGCTGATTCTCCTCTGAGACAAGAGAGGGACCTCAAAAGAAGGAAAATCACTCCATGTGGAAACAATCCAACGATGGACAATTCTTGGATTAACTAA 945 0.4349 MEFDLENPLENLHSDAVSYLFLIESDHTPSQNHSHTLKARDLDISVRRELVSLISQLSCTLDPALSYLATNYLDRFLASQGISQPKPWALRLIAVSCISLAVKMMRTECPDVQALMNQNDGGMIFETQTILRMEALILGALKWRMRSITPFSFIPFFIALMGLKGSPMGTVLRNRASEIVFMSQREIRLWEFKPSIIAASALLCASHELFPFQYPSFLKAISDSSYVNVNKESVEQCYKVIQDIAIEEEYESALNGVSRSDTPINVLDHFLSSESEKTNGITVADSPLRQERDLKRRKITPCGNNPTMDNSWIN* 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00187 314 CDD CYCLIN_AtCycD-like_rpt2 148 241 - -
Lapu11g00187 314 Pfam Cyclin, C-terminal domain 148 249 IPR004367 -
Lapu11g00187 314 Pfam Cyclin, N-terminal domain 21 145 IPR006671 -
Lapu11g00187 314 Gene3D - 20 239 - -
Lapu11g00187 314 SMART cyclin_7 48 139 IPR013763 -
Lapu11g00187 314 FunFam D6-type cyclin 144 239 - -
Lapu11g00187 314 SUPERFAMILY Cyclin-like 12 145 IPR036915 -
Lapu11g00187 314 PANTHER CYCLINS 17 252 IPR039361 -
Lapu11g00187 314 FunFam D6-type cyclin 30 143 - -
Lapu11g00187 314 SUPERFAMILY Cyclin-like 129 246 IPR036915 -
Lapu11g00187 314 SMART Cyclin_C_2 148 263 IPR004367 -
Lapu11g00187 314 Gene3D - 30 146 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00187 Lapu-Chr11 4476821 4479307 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00187 1 296 Core Cell Cycle Gene Families AT4G03270 43.631 8.51e-70 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00187 K18812 - gmx:100820404 501.13