Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00177 ATGTCATTTAGGATACTCACAGACCCAGGTGGTGGTGGTGTTGTTGCATATTCAGAATCACAAACAGGAGCTGACCGTCCTATTATTAATGCTAAGGAACCCTCCAAAAAGAAAGTGGTGGTTCTTGGAACAGGATGGGCTGCTACCAGTTTCCTTAAGGATCTGGATGCTTCATTATATGATGTTCAGGTTGTTTCACCCCGTAACTACTTTGCATTTACTCCCTTATTACCCAGTGTCACTTGTGGGACAGTTGAAGCACGGAGCATTGTGGAACCAGTCCGAAACATCATTAAAAAGAGAAAAGGAGAAATAAACTTTTGGGAAGCAGAATGTGTCAAAATTGATTCTTCAAACAAAAAGGTTTTCTGTCGGTCCAATATTGATAACTTGGTGGGAAATGGCGAATTTTCCTTGGACTATGACTTCTTGGTTGTAGCAGTAGGAGCACAAGTAAATACATTTAACACCCCTGGCGTCAAGGAGAACTGTCATTTTCTGAAGGACGTTGAGGATGCTCAGAAGATCAGACTGTCTGTGATTGATTGCTTTGAGAAGGCTGTTCTTCCTAGTATAACTGATGAAGAGCAAAGGTCAATTCTTCATTTTGTAGTAGTGGGAGGAGGTCCAACTGGTGTAGAATTTGCTGCAGAACTGCATGATTATGTCCTAGAAGATTTAATCAAATTATATCCAATTGTTAAAGATAAAGTGAAAATAACATTGATTCAATCAGGAGATCACATCTTGAACATGTTTGATGAAAGAATAAGTTCATTTGCTGAGCAAAAATTTACAAGAGATGGAATCGAAGTCCAAACAGGAAGCCGGGTTGTTGGTGTTAATGACAACGTTATTACAATGAAGGCAAAATCAACGGGAGAGGTTTGCTCGGTGCCCCATGGATTAGTTGTCTGGTCAACTGGCATTTCAACTCTTCCAGTTATAAGGGACTTTATGGAAGAAATTGGTCAGGCTAAAAGGCATGTACTAGCAACTAATGAATGGTTGCGAGTGAAAGGATGTGAAGATGTATATGCCATTGGTGATTGTTCTAGCATAACTCAACGTAAAATCATGGATGATATCACAGCCATATTTGAGTCAGCTGACAAAAACAAGTCAGGCACCTTAACTATTGAAGAATTCCAGGAGGTGATGGATGACATTGTCTTAAGATATCCGCAAGTTGAACATTATCTAAACCAGAAACATCTGCGCGATTTCACCACTCTGTGGAAAGATATACAAGGGAATGAAAGCAAAGAAATAGACATAGAAGCATTTAAGCTGGCCCTTTCTCATGCAGATTCACAGGTGAAGAGTCTTCCAGCAACTGCACAGGTTGCTGCCCAACAAGGTGCATATCTAGCCAGATGCTTTAACCACAGGGATCATGCTGAAGAACATCCTGAAGGTCCTCGACGATTTAGTGGATCTGGACGCCATAAGTTTCTCCCCTTCCGGTATAGGCATTTGGGTCAATTTGCTCCACTGGGTGGGGAGCAGGCTGCTGCAGAACTTCCTGGAGACTGGGTTTCCATGGGTCATAGCACTCAATGGCTTTGGTATTCTGTATATGCAAGGAGTTTCACAATGCGTTGGTCTTCCAGCTTCTTTCACACAGCCTCGAGGGTTTTCAATGAGTATCCATCATGGTCCAAGTCTGTTCTTGTTTGCACTGTCATCAGTGGTGGAGGAGCAGTGGCATTTTGCGATACGAAACCAGAATATGGCAATGAATGTCCAAAGAAGAAGGTGGTGGTGCTTGGAACTGGTTGGGCTGGAACCAGTTTTCTGAAAAATATTAAAAGCAACTCCTATGATATTCATGTGGTTTCACCACGTAACTATTTTGCATTCACTCCATTGCTACCAAGTGTAACATGTGGCTCAGTGGAAGCAAGGAGTGTTGTTGAACCCATTCGCAACATCACCCGCAAGGAGAACACTGTTCAACAGAGCGGTGTAAATATTCATTTCAGTGAAGCTGAATGCTATAAAATCGATCACAAGAACAACAAAGTTTTTTGTCGAGCTGGTAAGGACAAAACATCTGGCGGTCAAGAAGAGTTTTCCATTGATTATGATTACCTGGTAATAGCTATGGGAGGTCGTTCTAATACCTTCAACACACCCGGTGTTGAGGAATACGCTCATTTCCTGAAGGAAGTGGATGAAGCTCTAAAAATCCGTCACAAAGTGGTGGAACTTTTTGAAAGAGCTAGCCTTCCTTCTTTACCTGTGGAAGAGAAGAAAAGGCTTCTGAGTTTTGTAGTTGTTGGTGGTGGTCCAACTGGGGTAGAATTTTCTGCTGAGCTTCATGACTTTGTACATGAGGATATGGCTTTGTTATATCCTGCCCTTAAAGATTATGTGAAGATTACTCTCTTGGAGGCAGGCGATCATATCTTAAACATGTTTGACAAGAGAATTACAGAATTTGCTGAACAAAAGTTTGCCAGAGATGGCATTAATGTGAAGTTGGGAGCTATGGTTGTGAAAGTTGGTGAAAATGACATCACTGCCAAAGAAAGGTCAACAGGTCAAGTTGTTTCCATACCTCACGGAATGGTAGTTTGGTCAACTGGTATTGGTGCTCGCCCTGAAGTAGTTGAATTTATGAAACAGCTTGGTCAGATTAACAGACGTGCATTGGTCACTGATGAATGGCTAAGGGTGGAAGGATCTGACAACATCTATGCTCTTGGTGATTGTGCCACTATAAATCAACGTAAAGTTATGGAAGATATAGCCGTGATATTTAGCAAGGCTGACAAGAGCAATTCTGGAAAGTTAAATCTTAAAGAATTTAAAGACGTTGTTGGTGACATTATTGAAAGGTACCCTCAAGTGGACATTTATTTAAAGAAGAATCAAATGAAAGACATGGCCAGCTTGCTAAAGAAATCTCAAGAAAGCGGCATTACAGTGGACATCGAATACTTCAAAGAAGCCCTTTCCAAAGTAGACTCGCAGATGAAAAACCTTCCTGCCACAGCTCAGGTAGCTGCACAGCAAGGAGTGTATCTTGCAGACTGTTTCAACCGCATGGAGTTGTGTGAAATGTATCCTGAAGGCCCCCTCAGGTTCAGAGGAGTTGGTCGCCATCGATTCCGTCCCTTCAGGTACAAGCATTTGGGACAATTTGCTCCTCTAGGAGGAGAGCAAACTGCAGCTCAGCTTCCAGGAGATTGGATTTCAATTGGTCAGAGCACCCAGTGGCTCTGGTATTCAGTGTATACAAGCAAACAAGTGAGCTGGAGGACAAGATTTTTGGTGGTTGGTGACTGGGGAAGGAGATTCATATTTGGTAGGGATTCAAGTCAAATCTAA 3336 0.4218 MSFRILTDPGGGGVVAYSESQTGADRPIINAKEPSKKKVVVLGTGWAATSFLKDLDASLYDVQVVSPRNYFAFTPLLPSVTCGTVEARSIVEPVRNIIKKRKGEINFWEAECVKIDSSNKKVFCRSNIDNLVGNGEFSLDYDFLVVAVGAQVNTFNTPGVKENCHFLKDVEDAQKIRLSVIDCFEKAVLPSITDEEQRSILHFVVVGGGPTGVEFAAELHDYVLEDLIKLYPIVKDKVKITLIQSGDHILNMFDERISSFAEQKFTRDGIEVQTGSRVVGVNDNVITMKAKSTGEVCSVPHGLVVWSTGISTLPVIRDFMEEIGQAKRHVLATNEWLRVKGCEDVYAIGDCSSITQRKIMDDITAIFESADKNKSGTLTIEEFQEVMDDIVLRYPQVEHYLNQKHLRDFTTLWKDIQGNESKEIDIEAFKLALSHADSQVKSLPATAQVAAQQGAYLARCFNHRDHAEEHPEGPRRFSGSGRHKFLPFRYRHLGQFAPLGGEQAAAELPGDWVSMGHSTQWLWYSVYARSFTMRWSSSFFHTASRVFNEYPSWSKSVLVCTVISGGGAVAFCDTKPEYGNECPKKKVVVLGTGWAGTSFLKNIKSNSYDIHVVSPRNYFAFTPLLPSVTCGSVEARSVVEPIRNITRKENTVQQSGVNIHFSEAECYKIDHKNNKVFCRAGKDKTSGGQEEFSIDYDYLVIAMGGRSNTFNTPGVEEYAHFLKEVDEALKIRHKVVELFERASLPSLPVEEKKRLLSFVVVGGGPTGVEFSAELHDFVHEDMALLYPALKDYVKITLLEAGDHILNMFDKRITEFAEQKFARDGINVKLGAMVVKVGENDITAKERSTGQVVSIPHGMVVWSTGIGARPEVVEFMKQLGQINRRALVTDEWLRVEGSDNIYALGDCATINQRKVMEDIAVIFSKADKSNSGKLNLKEFKDVVGDIIERYPQVDIYLKKNQMKDMASLLKKSQESGITVDIEYFKEALSKVDSQMKNLPATAQVAAQQGVYLADCFNRMELCEMYPEGPLRFRGVGRHRFRPFRYKHLGQFAPLGGEQTAAQLPGDWISIGQSTQWLWYSVYTSKQVSWRTRFLVVGDWGRRFIFGRDSSQI* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00177 1111 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 29 387 - -
Lapu11g00177 1111 SUPERFAMILY FAD/NAD(P)-binding domain 750 910 IPR036188 -
Lapu11g00177 1111 ProSiteProfiles EF-hand calcium-binding domain profile. 913 948 IPR002048 GO:0005509
Lapu11g00177 1111 PANTHER NADH DEHYDROGENASE 580 1111 IPR045024 GO:0003954|GO:0006116
Lapu11g00177 1111 SUPERFAMILY FAD/NAD(P)-binding domain 199 355 IPR036188 -
Lapu11g00177 1111 ProSiteProfiles EF-hand calcium-binding domain profile. 358 393 IPR002048 GO:0005509
Lapu11g00177 1111 Pfam EF hand 366 387 IPR002048 GO:0005509
Lapu11g00177 1111 SUPERFAMILY FAD/NAD(P)-binding domain 584 809 IPR036188 -
Lapu11g00177 1111 SMART efh_1 362 390 IPR002048 GO:0005509
Lapu11g00177 1111 SMART efh_1 917 945 IPR002048 GO:0005509
Lapu11g00177 1111 ProSitePatterns EF-hand calcium-binding domain. 371 383 IPR018247 -
Lapu11g00177 1111 Pfam Pyridine nucleotide-disulphide oxidoreductase 37 360 IPR023753 GO:0016491
Lapu11g00177 1111 Gene3D - 27 410 - -
Lapu11g00177 1111 Gene3D - 427 544 - -
Lapu11g00177 1111 Gene3D - 961 1110 - -
Lapu11g00177 1111 Gene3D - 579 960 - -
Lapu11g00177 1111 Pfam Pyridine nucleotide-disulphide oxidoreductase 585 915 IPR023753 GO:0016491
Lapu11g00177 1111 ProSitePatterns EF-hand calcium-binding domain. 926 938 IPR018247 -
Lapu11g00177 1111 PRINTS FAD-dependent pyridine nucleotide reductase signature 885 907 - -
Lapu11g00177 1111 PRINTS FAD-dependent pyridine nucleotide reductase signature 587 606 - -
Lapu11g00177 1111 PRINTS FAD-dependent pyridine nucleotide reductase signature 757 775 - -
Lapu11g00177 1111 PRINTS FAD-dependent pyridine nucleotide reductase signature 696 714 - -
Lapu11g00177 1111 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 575 942 - -
Lapu11g00177 1111 SUPERFAMILY FAD/NAD(P)-binding domain 36 254 IPR036188 -
Lapu11g00177 1111 SUPERFAMILY EF-hand 359 984 IPR011992 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00177 Lapu-Chr11 4367528 4381429 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00177 5 528 Chloroplast and Mitochondria Gene Families AT4G21490 63.138 0.0 677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00177 K03885 - gmx:100820044 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lapu11g00177 11 4367528 4381429 Lapu11g00177 11 4367528 4381429 ECH