Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00169 ATGAAAAACTTTTTTCTTTCAGACAACCAGTTTACTGGAAGTATACCGGCCACTTTATCCACTTTGACTGGACTGACAGACATGTCTCTTAACGACAATTTCTTAACTGGAGAAATACCCGATGCTTTTCAGTCACTTACGCTCTTGATCAATCTTGATTTATCTCATAATAATTTGAGTGGGGAATTGCCTTCTTCTATGGATAACTTGTCGTCTCTGACCACCCTACGCTTACAAAACAATCAATTGTCTGGGACACTTGATGTTTTACAAGACCTTCCTCTGAAAGATTTGAATATTGAGAACAACCAGTTTGCTGGCCCAATACCTCCAAAGTTGCTAAGCATCCCAACCTTCAGGCAAGCTGGAAACCCATTTAATGTTAATGGTTCTACAACACCGGCCTCTTCACCTCGCTCCCCAGCAATAGTAGCACCACCGGGAACTCCTATTTCTGGGGCACCACCAGGAACACCTGTCTCTGGGGCACCACCATCTTCTGGCCGTGTACCTACTAAACAGGCTGATGGACCAGCTGCAGCAAATGAATCACACACTGCAAAATCCAAAAAATCCTCAAAAAGGGTTGTTTGGATATCTATTGGTAGTGTGTTGGGATTCATTATTTTGTTACTAGGATTCATTCTCTTTATTCCAAGATGTAGCAGAAGAGAACGGGATGGCAGAAGGTTCAAGCAAGGTCAAATTGGTGCATATGGGGCCGACAGACAAATTGTCAGGGATAACGGGGATTCAGTCCAACCACCTAGTCAAATGGAAAAAGGTAATATACCCAGTCCTTCATTTAATTTTTTATCTAACTCAGTACCAGTAGGGGATGTTCCAAGGCCAAAAGAGGGTCGTCAGGCAGAGACCAGGGCAGTCTGGGCTAATCCAAAACCACAGAGTGAGCAAGAGAAGGATGTGAAAAGAATGGCAACAATACCAAAGCCAGGAGATCATGAGATAGATATTAGTACACTAGAAGTATATTCAATGCCTCCTCCCCCTCCACCGCCACCACCCCCACCACCTCCACCACCGCCTCCACCTCCACCTCCTACTACTGAGAAGGTGATTGTTGAGCCAGCCACATCCCGCAGGACAACTAGTGTCACTCCACTCATAAGAAGTTCAGCTCCTCCTACTTTTGCAAAATTTTTTGCTATTGCGTCCCTTCAACAGTATACAAATAGCTTTTCTCAAGAAAATCTTATCGGAGGAGGCATGCTGGGTAATGTGTATAGAGCTGAGCTTCCTAATGGCAAGTTACTTGCTGTAAAGAAACTGGACAAGAGAGCTTCTGATAACCAGAAGGATGAGGAATTTCTTGAATTGATTAATAGTATTGACAGAATAAGGCACGCAAATGTTGTTGAGCTTGTTGGATACTGTTCAGAGCATGGTCAAAGGCTTCTTATATATGAGTACTGTAGTAATGGCTCACTGTATGACGCACTCCACTCAGATGATGACTTCAAAACAAGACTCTCATGGAATGCTCGAATTCGGATAGCTCTTGGGGCAGCCAGAGCCTTAGAATATCTGCATGAGCTATGTCAGCCAGCGGTAGTACATAGAAATTTGAAGTCTGCCAATGTTCTGCTTGATGATGATCTATCCGTGCGGGTTTCTGATTGTGGTTTAGCTCCATTAATAGCTTCAGGATCAGTCAGTCAGCTCTCGGGGAACCTGTTAACTGCTTATGGCTATGGAGCTCCTGAATTTGAGTCTGGAATATACACATACCAAAGTGATGTGTACAGCTTTGGAGTGATCATGTTAGAACTTTTGACTGGCCGTCAGTCCCATGACAGGACACGTCCACGGGGGGAGCAATTTCTAGCCAGATGGGCAGTTCCCCAACTTCATGACATTGATGCGTTATCGAGCATGGTGGATCCTTCTTTAAAGGGGGATTACCCAGCAAAATCAATGTCAAATTTTGCAGACATTATCTCTAGATGCCTTCAGTCGGAACCAGAATTCAGGCCAGCAATGTCCGAGGTTGTCCTATACTTACTAAACATGATAAGGAGGGAGTCTCAGCAAAGCGAGTCAAATGAAAAATGA 2073 0.4414 MKNFFLSDNQFTGSIPATLSTLTGLTDMSLNDNFLTGEIPDAFQSLTLLINLDLSHNNLSGELPSSMDNLSSLTTLRLQNNQLSGTLDVLQDLPLKDLNIENNQFAGPIPPKLLSIPTFRQAGNPFNVNGSTTPASSPRSPAIVAPPGTPISGAPPGTPVSGAPPSSGRVPTKQADGPAAANESHTAKSKKSSKRVVWISIGSVLGFIILLLGFILFIPRCSRRERDGRRFKQGQIGAYGADRQIVRDNGDSVQPPSQMEKGNIPSPSFNFLSNSVPVGDVPRPKEGRQAETRAVWANPKPQSEQEKDVKRMATIPKPGDHEIDISTLEVYSMPPPPPPPPPPPPPPPPPPPPPTTEKVIVEPATSRRTTSVTPLIRSSAPPTFAKFFAIASLQQYTNSFSQENLIGGGMLGNVYRAELPNGKLLAVKKLDKRASDNQKDEEFLELINSIDRIRHANVVELVGYCSEHGQRLLIYEYCSNGSLYDALHSDDDFKTRLSWNARIRIALGAARALEYLHELCQPAVVHRNLKSANVLLDDDLSVRVSDCGLAPLIASGSVSQLSGNLLTAYGYGAPEFESGIYTYQSDVYSFGVIMLELLTGRQSHDRTRPRGEQFLARWAVPQLHDIDALSSMVDPSLKGDYPAKSMSNFADIISRCLQSEPEFRPAMSEVVLYLLNMIRRESQQSESNEK* 691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00169 690 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 1 87 - -
Lapu11g00169 690 ProSiteProfiles Leucine-rich repeat profile. 72 94 IPR001611 GO:0005515
Lapu11g00169 690 MobiDBLite consensus disorder prediction 303 324 - -
Lapu11g00169 690 Pfam Protein tyrosine and serine/threonine kinase 403 672 IPR001245 GO:0004672|GO:0006468
Lapu11g00169 690 MobiDBLite consensus disorder prediction 250 275 - -
Lapu11g00169 690 Gene3D Phosphorylase Kinase; domain 1 364 477 - -
Lapu11g00169 690 Pfam Leucine rich repeat 3 59 IPR001611 GO:0005515
Lapu11g00169 690 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 365 477 - -
Lapu11g00169 690 Gene3D Ribonuclease Inhibitor 1 136 IPR032675 -
Lapu11g00169 690 MobiDBLite consensus disorder prediction 331 358 - -
Lapu11g00169 690 ProSiteProfiles Protein kinase domain profile. 400 674 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00169 690 MobiDBLite consensus disorder prediction 140 162 - -
Lapu11g00169 690 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 2 685 IPR046959 -
Lapu11g00169 690 SUPERFAMILY L domain-like 5 114 - -
Lapu11g00169 690 MobiDBLite consensus disorder prediction 125 189 - -
Lapu11g00169 690 Gene3D Transferase(Phosphotransferase) domain 1 478 690 - -
Lapu11g00169 690 MobiDBLite consensus disorder prediction 125 139 - -
Lapu11g00169 690 SUPERFAMILY Formin homology 2 domain (FH2 domain) 343 353 - -
Lapu11g00169 690 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 478 688 - -
Lapu11g00169 690 SUPERFAMILY Protein kinase-like (PK-like) 374 674 IPR011009 -
Lapu11g00169 690 MobiDBLite consensus disorder prediction 242 373 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00169 Lapu-Chr11 4251826 4259154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00169 1 685 Strubbelig Receptor Gene Family AT4G03390 58.714 0.0 722
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lapu11g00169 PK_Tyr_Ser-Thr 3.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00169 - - ahf:112737625 939.488