Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00164 ATGAATTTGATTGTTAAGGAAAGACCCCATTTTTCTGAGTTATGTCAGCATTCTGGAGTTAAGCAAATGGGTTGTTGTGTCTCAACAAGCAGTAGAAGTACTTGTAGCAGCAAGAGCAATGGAGACACGGTCTCTCAATCTTGTTTAGAAATTGGATTCTGTGGGCAGAAGAGAACGAGACGAACATTCTCTGATCATGTTATTTCTCTCCACCATTTACCATCCTTACCTAGCAGAATTTTTTCTAATGGAAAGAGCCGGGGTTCCTGCATCTTTACCCAGCAGGGCCGCAAGGGTATTAATCAGGATGCCATGATTGTGTGGGAAGATTTCATGTCTGAAGATATGATCTTTTGTGGTGTTTTTGATGGTCATGGTCCGCACGGTCATCTTGTTGCGCGCAAAGTTAGGGATGCCTTACCGGTTAAACTGCTATCATTTTTGCATTCTTCTGAATCAAAGCGAAACGGGTCAGGTAAAGCTTGCTTCAAAGGGAATGTAAAACCTGATAGTGTAGAATTTGAGAAGGATTGCTCCACAGAGGATAAAATGAACTCTATGTGGAGAGAAGCTTTCATGAAGGCATACAAGGCTATGGACAAAGAGCTCAGGTCTCATCCAAATTTGGATTGCTTCTGTAGTGGAAGCACTGCTGTGACCATAGTGAAGCAGGGTTCCAATCTGTTCATGGGCTATATTGGGGATTCTCGTGCAATCATGGGATCCAAGGATAGCAATGACTCCATGGTGGCTATTCAGTTGACAGTTGATTTGAAGCCTGATTTGCCAAGGGAAGCAGAAAGAATTAAGCGCTGCAAAGGTAGGGTATTTGCTTTGCAAGATGAGCCTGAAGTGCCTAGGGTGTGGTTGCCCTTTGATGATGCACCAGGATTAGCAATGGCCAGAGCATTTGGAGATTTCTGCTTGAAAGAGTATGGTGTGATTTCTATCCCTGAATTTTCCCATCGCCAGCTTACGGATAGAGATCAATTCATTGTTCTTGCTTCAGATGGGGTGTGGGATGTTTTAAGCAATGAGGAGGTGGTTGAGATAGTATCTTCAGCACCAACACGATCATCAGCGGCAAGGATTCTGGTAGATTCTGCTGCCAGGGAGTGGAAACTTAAATACCCTACTTCAAAGATGGATGACTGTGCTGTAGTATGCTTATTTTTGGATGGGAAAATGGACTCAGAATCTGATTATGATGAACAAGGCTTTTCTTCTGCAACCATCCAGAGCAACCATTCTGGTAACCCCATTGAGTCAGATGATGGACAAAAGTCTGAGCCATCATTGCAGAGGAACTTCACTGTGAGATCCTCAGAAGAAAATGAGACTAATGGAGCACTAACTATTGATGTTGAAGATGGAACATCATCAGCTGATGATCAAAACTGGTCAGGTTTGGAAGGGGTCACTCGTGTAAACTCACTTGTCCAACTTCCTAGATTTTCTGAGGAAAGGCCAAACTCTTGA 1479 0.4334 MNLIVKERPHFSELCQHSGVKQMGCCVSTSSRSTCSSKSNGDTVSQSCLEIGFCGQKRTRRTFSDHVISLHHLPSLPSRIFSNGKSRGSCIFTQQGRKGINQDAMIVWEDFMSEDMIFCGVFDGHGPHGHLVARKVRDALPVKLLSFLHSSESKRNGSGKACFKGNVKPDSVEFEKDCSTEDKMNSMWREAFMKAYKAMDKELRSHPNLDCFCSGSTAVTIVKQGSNLFMGYIGDSRAIMGSKDSNDSMVAIQLTVDLKPDLPREAERIKRCKGRVFALQDEPEVPRVWLPFDDAPGLAMARAFGDFCLKEYGVISIPEFSHRQLTDRDQFIVLASDGVWDVLSNEEVVEIVSSAPTRSSAARILVDSAAREWKLKYPTSKMDDCAVVCLFLDGKMDSESDYDEQGFSSATIQSNHSGNPIESDDGQKSEPSLQRNFTVRSSEENETNGALTIDVEDGTSSADDQNWSGLEGVTRVNSLVQLPRFSEERPNS* 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00164 492 CDD PP2Cc 87 392 IPR001932 -
Lapu11g00164 492 PANTHER PROTEIN PHOSPHATASE 65 390 IPR015655 GO:0004722|GO:0006470
Lapu11g00164 492 FunFam probable protein phosphatase 2C 52 79 395 - -
Lapu11g00164 492 Gene3D - 85 400 IPR036457 -
Lapu11g00164 492 SUPERFAMILY PP2C-like 79 394 IPR036457 -
Lapu11g00164 492 ProSiteProfiles PPM-type phosphatase domain profile. 88 392 IPR001932 -
Lapu11g00164 492 MobiDBLite consensus disorder prediction 403 469 - -
Lapu11g00164 492 MobiDBLite consensus disorder prediction 402 469 - -
Lapu11g00164 492 Pfam Protein phosphatase 2C 158 369 IPR001932 -
Lapu11g00164 492 SMART PP2C_4 72 390 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00164 Lapu-Chr11 4134784 4140166 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00164 23 492 PP2C-type Phosphatase Gene Family AT1G03590 70.502 0.0 640
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00164 - - gmx:100813306 895.96