Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00161 ATGGAGACTGTTCTTTCCAATCACTCCCCACCTTTGGAATTCAAGGGTTTGAGCAAGGAGGAGGAAGAGTCATTGCTAGGGCAAGTTGAGATATGGAGGTACATGACATGCTTCACTGACTCTGTGGCCATAAAATGTGTGGTAGAGCTTCGCATAGCCGATATAATAGACCGCTATGCTAAGCCACTATCCTTGTCTCAAATTGTGGAGAACATTGAGGATGCACCCTCCCCAGATGCCAATCTTCTCGAGAGAGTGATGAGAGTGATGGTGCGCAGAAAGATCTTCAGTGCAGAGAAATCAGAGACTGGAGAGACCCTTTATGGCTTGACGCGTGCTTCCAAATGGATCCTACGAGACACAAAAATGACCCTAGCACCCATGTTGCTGCTGGAGAACCACCCAATTCACCTCAACCCTGCTCACTACATCAGTGAGATTGTGAGAGAAGGCACGAAAAATGGCACTGCTTTCTTTAAGTGTCATGGGCATGAGCAATTTGAGATGACGGGGTTGGACCCTGAGTACAACAGGTTGTTCAATGAGGGGATGGTGTGCACGGCCAGGGTTGTCTCCAAGGCTGTGATCAATGGGTACAGAGATGGGTTCAACCAGATTGAGTCCCTGGTTGATGTAGGAGGTGGCATTGGAGGGTCACTTTCTGAGATTGTGAGGGCTTACCCTCACATCAAGGCCATTAACTTTGACTTGCCTCATGTGGTTTCCACTGCACCTAAGTTTGATGGAATCACCCATGTTGGAGGTGACATGTTCGTCTCCATTCCCAGTGCTGATGCCATTTACATGAAGTGGATTTTGCATGACTGGAGCGACGAGCACTGCATCCAGATCTTGAAGAACTGCAGGAAAGCAATACCGGAGAAGACAGGAAAGGTGATAATTGTGGATCATGTGCTTCGACCCGAAGGGAACGAACTCTTCGCAGACATTGGCATTGCATTTGACATGATGCTTCTGGCTCACAACGCTGGTGGCAAAGAGAGGACCGAAGAGAATTGGAAGTGGCTATTCAAAGAAACAGGATTCGCTCGTTACAACATCATCAAGATCAAGGCTCTCCCCTCCATCATTGAGGCGTTTCCAATCTGA 1110 0.4811 METVLSNHSPPLEFKGLSKEEEESLLGQVEIWRYMTCFTDSVAIKCVVELRIADIIDRYAKPLSLSQIVENIEDAPSPDANLLERVMRVMVRRKIFSAEKSETGETLYGLTRASKWILRDTKMTLAPMLLLENHPIHLNPAHYISEIVREGTKNGTAFFKCHGHEQFEMTGLDPEYNRLFNEGMVCTARVVSKAVINGYRDGFNQIESLVDVGGGIGGSLSEIVRAYPHIKAINFDLPHVVSTAPKFDGITHVGGDMFVSIPSADAIYMKWILHDWSDEHCIQILKNCRKAIPEKTGKVIIVDHVLRPEGNELFADIGIAFDMMLLAHNAGGKERTEENWKWLFKETGFARYNIIKIKALPSIIEAFPI* 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00161 369 FunFam O-methyltransferase family protein 119 367 - -
Lapu11g00161 369 SUPERFAMILY "Winged helix" DNA-binding domain 21 120 IPR036390 -
Lapu11g00161 369 Gene3D Vaccinia Virus protein VP39 119 369 IPR029063 -
Lapu11g00161 369 Pfam Dimerisation domain 43 91 IPR012967 GO:0046983
Lapu11g00161 369 PIRSF O-mtase 12 369 IPR016461 GO:0008168
Lapu11g00161 369 Gene3D - 15 117 IPR036388 -
Lapu11g00161 369 Pfam O-methyltransferase domain 143 350 IPR001077 GO:0008171
Lapu11g00161 369 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 366 IPR029063 -
Lapu11g00161 369 PANTHER O-METHYLTRANSFERASE 31 351 IPR016461 GO:0008168
Lapu11g00161 369 CDD AdoMet_MTases 209 306 - -
Lapu11g00161 369 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 32 368 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00161 Lapu-Chr11 4063061 4072881 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00161 42 355 Monolignol Biosynthesis Gene Families AT5G54160 37.383 4.29e-75 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00161 K22588 - gmx:100812768 699.508