Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00143 ATGGCCATCAAGACAAGTGCTTTTCCTTTTGCCATTACTTCAATGCAAAAGGAGAAGAAAATATTGGATTTATTTGTGGGGTGCAAAGAAATTCTTCAATGCTATTTCCATAAATTCACTCTTGAGAGGGGTTGTATAACTTACAATCTTTTCATGGAGTATGCTCCTTATGATTCTCTTGCTGATTTAATAAGGAATATGCCACTGTCAGAGAAGGAAGTCATAGCCTATACCTATATGCTTCTCAAGGGACTTTCTTGTATTCATGAAAAAGGAGTTGTTCATTGTGATCTCAAGCTAGATAATATTCTTCTCTTCCCTTCATCTAATGGTCATGCAAAGTATCAATTGAAGATTGTTGATTTTGGGTTGTCCAAGACTAAGGAAGAGACAAATGTTGATCTTGGAGAGATCAAGTTTAGAGGAACACCTTTATACATGTCACCGAAATCGGTTATGAGTTTTATGGAAACACCCTTAGATATATGGTCTCTTGGATGTATTGTTATTGAAATGATCACTCGACTCCCTCCATGGTGGAACTTACAAACCAGAGAGGAGCTAATGGGGAAGCTTGCATTCCTCCAAGAAGCACCAAAGATTATTTCAGCTCATGAAGCAGCACAATTCGTATGTATAACTGGACGTACCTATGAACTGAGACGTACATGGCGTGCACAGAAAATTCTCAAAACCAACATGAGAACTCTAGCCAAGATTTGGATGGATTTTCTTTTGGCAAATATCATTCTCAACACCCATATCTCGGATATAAACATAGCAAAAGCCCAATTATTGTACTGTATTATGAAGAAAGTTGTGGTTGATGTGGCTGAGATAATTTCAGAAGAGTTGCACAAGTTTGTTCTTTCTCAACCCACCTCTGGAGGCACAGCAAAGCCATTAGGATTCCCTAGTTTCATCACTGGATTGTGCAAATCAAACGGAGTAGAAATTGCAAGTCATCCAATGAAAAAATTGAGGTTTCCTATTAACAAGGCTTATATTACAGCACATTGTACCAATCCCCTAGATCAAGTTCAAGGACTCGCCGCTAGGCTGCAACTGCACCCAAGAGCCCAACCCCAACCCCAATCAACTCCTGAACCATCATAA 1116 0.3916 MAIKTSAFPFAITSMQKEKKILDLFVGCKEILQCYFHKFTLERGCITYNLFMEYAPYDSLADLIRNMPLSEKEVIAYTYMLLKGLSCIHEKGVVHCDLKLDNILLFPSSNGHAKYQLKIVDFGLSKTKEETNVDLGEIKFRGTPLYMSPKSVMSFMETPLDIWSLGCIVIEMITRLPPWWNLQTREELMGKLAFLQEAPKIISAHEAAQFVCITGRTYELRRTWRAQKILKTNMRTLAKIWMDFLLANIILNTHISDINIAKAQLLYCIMKKVVVDVAEIISEELHKFVLSQPTSGGTAKPLGFPSFITGLCKSNGVEIASHPMKKLRFPINKAYITAHCTNPLDQVQGLAARLQLHPRAQPQPQSTPEPS* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00143 371 Gene3D Transferase(Phosphotransferase) domain 1 2 243 - -
Lapu11g00143 371 SMART serkin_6 1 242 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00143 371 Pfam Putative plant transposon protein 205 317 IPR046796 -
Lapu11g00143 371 ProSiteProfiles Protein kinase domain profile. 1 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lapu11g00143 371 ProSitePatterns Serine/Threonine protein kinases active-site signature. 93 105 IPR008271 GO:0004672|GO:0006468
Lapu11g00143 371 SUPERFAMILY Protein kinase-like (PK-like) 9 196 IPR011009 -
Lapu11g00143 371 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 3 211 - -
Lapu11g00143 371 Pfam Protein kinase domain 15 203 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00143 Lapu-Chr11 3811763 3819609 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00143 1 179 MAP Kinase Kinase Kinase AT4G36950 41.304 4.93e-37 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lapu11g00143 Pkinase 2.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00143 - - gmx:102660670 275.018