LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lapu11g00132	ATGTCAATTCTTCTCGTCTCTTCCCTTTTTCTCACCACAAACCTTATCCTTCTAACCTCAGTTTCATCTACAGAGTTCATCTACAATACCAACTTCAACTCCACCAACACCCTTATCTATGGCAACGCCACTATTGAATCTTCCGTTCTCACCCTTACCAACCATTCCACCTTCTCTGTGGGCCGTGCTTTCTACCCTTCCAAGATCCCCACCAAATCTTCCAACTCTTCAACCCCTTTACCTTTCTCAACCTCCTTCATTTTCTCAATTGCCCCATTCAAAGGCCTTCTCCCTGGCCATGGCTTTGTCTTCATATTGTCACCTTCTGCTGGCACCTCTGGGGTGAGTTCTGCTCAGCATCTTGGCCTCTTCAACTTGACCAACAATGGTGATCCCAACAACCATGTCTTTGGCATTGAGTTTGACGTGTTTGACAACCAAGAGTTCAATGACATCGATGACAATCATGTGGGGGTAGATATAAACTCTCTTGTTTCTTTTACTTCCAGTACTGCTGGATTTTGGGGTGAGACGGGTGGTGACAAGTTTGAGGATTTGAAGCTTAATAATGGTGAGAACTATCAAGTGTGGATTGACTATTTAGACTCTAGAGTTAATGTTACAATAGCTCTTGCAGGCCAACATAGACCACAGAAACCTTTGATTAGTGAGCTTGTGGATCTTTCTGAAGTGCTTTTGGATGAAATGTATGTTGGATTTTGTGGGGCAACAGGGCAGCTAGTGGAGAGTCATAAGATTTTGGCTTGGAGCTTCAGTAACTCAAATGTTTCTATTGGTGATGCTTTAGTTACTACTAATTTGCCTTCGTTTGTGCTTCCCAAAGAATCTATTTTTAGGTCAAAAGGTTTTGTTGTAGGAATCACTACAGGTGTTTTGTTTGTCATTGGTAGTGCTGTTGTGATATTTGTGATTTTTCTTAGAAGAAAAAGGAGAAAAAGAAAGGAAGAGGAAGAAGACATTGAAGATTGGGAACTGGAGTATTGGCCACACCGTGTAAGATATGAGGACATTTATGCTGCAACTAAAGGATTTTCTGACCAAAATGTAATTGGATTCGGAGGGAATGGAAAAGTCTACAAAGGGCTTCTGCAAGGAGTACAAGTTGCAGTCAAAAGAATTCCTTGCGACAGTGAACGTGGAATGAGAGAGTTTTTGTCTGAGATTTCAAGTTTAGGCAGGTTGAAGCATAGGAATGTGGTTCCATTGAGAGGTTGGTGCAAGAAAGAGAAAGGGAGCTTGATTTTAATCTATGACTATATGGATAATGGAAGTTTAGATAAAAGAATATTTGATGATGATGAGAACACAATTTTTGGGTGGGAGGAGAGAGTGAAGGTGCTGAAGGATGTGGCTCATGGAATATTGTATTTGCATGATGGTTGGGAGGTTAAGGTGTTGCACAGAGACATCAAGTCAAGCAATGTGTTACTTGATAAGGATATGAATGCAAGATTGGGGGATTTTGGACTAGCCACAATGCATCATCACGAGCACATTGGTCACACCTCACAAGTGATTGGAACTGTTGGTTTCATGGCACCAGAACTTATTCATACTGGGAGAGCCTCAACTCAGACCGATGTGTTCAGCTTTGGTGTGTTGGTTTTAGAGGTGGTGTGTGGGAGAAGGCCAAATATGGAAAACAAGCCAACCTTGGTTATTTGGTTAATGAGGCTAATGGAGAGAGGAGAAGAGTGTTCTGCTCTTGATGAAAGATTAAAAGGGAGAAGTGATTGTAACATGGATGAGGTTAAGAGGGTTCTTCATCTTGGTTTGTTGTGCACTCATCCTGATCCTCATGTTAGGCCAAGTATGAGACAGGTTGTGAAAGTGCTGGAGGGAGAGAATTTAGATGCAAGTTTGCTTGAAAAAATAAATTCAGCAGCTGCATATATTGGGAGCTTTGCTAACAGCATTCACCCCACAATTGAGGATATCTTCTCCTCCCACTGCTCTTTCTCAACTGTGTGTCACAGTGAAGGCAGATGA	2010	0.4189	MSILLVSSLFLTTNLILLTSVSSTEFIYNTNFNSTNTLIYGNATIESSVLTLTNHSTFSVGRAFYPSKIPTKSSNSSTPLPFSTSFIFSIAPFKGLLPGHGFVFILSPSAGTSGVSSAQHLGLFNLTNNGDPNNHVFGIEFDVFDNQEFNDIDDNHVGVDINSLVSFTSSTAGFWGETGGDKFEDLKLNNGENYQVWIDYLDSRVNVTIALAGQHRPQKPLISELVDLSEVLLDEMYVGFCGATGQLVESHKILAWSFSNSNVSIGDALVTTNLPSFVLPKESIFRSKGFVVGITTGVLFVIGSAVVIFVIFLRRKRRKRKEEEEDIEDWELEYWPHRVRYEDIYAATKGFSDQNVIGFGGNGKVYKGLLQGVQVAVKRIPCDSERGMREFLSEISSLGRLKHRNVVPLRGWCKKEKGSLILIYDYMDNGSLDKRIFDDDENTIFGWEERVKVLKDVAHGILYLHDGWEVKVLHRDIKSSNVLLDKDMNARLGDFGLATMHHHEHIGHTSQVIGTVGFMAPELIHTGRASTQTDVFSFGVLVLEVVCGRRPNMENKPTLVIWLMRLMERGEECSALDERLKGRSDCNMDEVKRVLHLGLLCTHPDPHVRPSMRQVVKVLEGENLDASLLEKINSAAAYIGSFANSIHPTIEDIFSSHCSFSTVCHSEGR*	670

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lapu11g00132	669	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	472	484	IPR008271	GO:0004672\|GO:0006468
	Lapu11g00132	669	ProSiteProfiles	Protein kinase domain profile.	351	628	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g00132	669	Pfam	Legume lectin domain	24	262	IPR001220	GO:0030246
	Lapu11g00132	669	ProSitePatterns	Protein kinases ATP-binding region signature.	357	378	IPR017441	GO:0005524
	Lapu11g00132	669	Gene3D	Transferase(Phosphotransferase) domain 1	427	636	-	-
	Lapu11g00132	669	SUPERFAMILY	Concanavalin A-like lectins/glucanases	22	263	IPR013320	-
	Lapu11g00132	669	Gene3D	Phosphorylase Kinase; domain 1	311	426	-	-
	Lapu11g00132	669	SUPERFAMILY	Protein kinase-like (PK-like)	329	620	IPR011009	-
	Lapu11g00132	669	Pfam	Protein kinase domain	352	617	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g00132	669	FunFam	L-type lectin-domain containing receptor kinase S.4	427	631	-	-
	Lapu11g00132	669	Coils	Coil	313	333	-	-
	Lapu11g00132	669	Gene3D	-	22	272	-	-
	Lapu11g00132	669	SMART	serkin_6	351	619	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lapu11g00132	669	FunFam	Putative L-type lectin-domain containing receptor kinase VII.2	310	426	-	-
	Lapu11g00132	669	CDD	STKc_IRAK	357	621	-	-
	Lapu11g00132	669	PANTHER	-	41	623	-	-
	Lapu11g00132	669	CDD	lectin_legume_LecRK_Arcelin_ConA	24	261	IPR001220	GO:0030246
	Lapu11g00132	669	FunFam	L-type lectin-domain containing receptor kinase S.4	22	266	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lapu11g00132	Lapu-Chr11	3644774	3646784	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lapu11g00132	21	570	Receptor kinase-like Gene Family	AT4G04960	60.830	0.0	667

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Lapu11g00132		Pkinase	5.9e-46	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lapu11g00132	-		-	gmx:100807059	1127.08