Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00097 ATGTCATCCCCATCAATGTCCATTTCATCCTTTTTTTTCCTCTCCCTCTTTCTACCTTTGCTCTTAGCTCAAACTCCATCACCATCTCCCACACATGCTCCTTCTCCATCACCATCTCCAACACATACTCCTTCTCCTTCTCCAACACATTCACATGCTACTTCTCCTTCTGCATCATCATCTCCAACTCATACTCCTACTCCTTCTCCATCACCCTCTCCAAAAAGTGCTCCTCCTCCACCTCTTCCACCTACTTCAACCTCTTCAGCATGCAAGGCTACATTATATCCAAAACTCTGCCGTTCCATTCTCTCATCCATTCGTTCCTCACCTTCTGACCCTTACAAATTGGGCAAATTCTCCATCAAACAAAGCCTCAAACAAGCCAAGAAACTGGCCAAAGTCTTCGCGGATTTCCTCAAAAAGCACAAATCTTCTTCTCTCAGCAGCGCAGAGATTGCAGCCCTAGAAGACTGCAGTGAGCTGAACCAGCTCAGTGTTGGCTACTTGGAGTCAGTTTCACAAGAGCTGAAATCTGCAGACTCATCCAACACAGAGTTGGTTGAAAAGATTGAAACATACCTCAGTGCTGTGGCCACTAACCATTACACTTGCTATGATGGGTTGGTGGTGATCAAGAGCAGCATTGTCAATGCTCTTGCTGTGCCTCTCAACAATGTCACACAACTCTATAGTGTGTCACTTGGGTTGGTCACGCAGGCTCTCAAGAAGAATCTCAAGAAGCATAAGACCCGCAAACATGGTCTTCCCACCAAGAATTACAAGGTCAGACAGCCATTGAAAAAGCTCATTAAGCTTCTTCACACAAAGTACAGTTGCGCAACATCATCCAATTGCAGTACTAGAAGTGAAAGGATTCTTAAAGAAACTGAAAACAAAGGAATTCTACTTAAAGACTTTGTGATTGTGAACCTTAATGGCACAGACAACTTCACCTCCATTGGAGAGGCTATTGCAGCTGCACCAGATAATTTAAGGGCAGAAGATGGCTATTTCCTTATCTATGCAAAAGAAGGATCCTATGAGGAATATGTCATTGTTCCCTCTCAAAAGAAGAATATCTTGCTTATTGGTGATGGTATCAACAAGACTTGCATCACAGGAAACCATAGTGTTGTAGATGGTTGGACCACTTTCAATTCTTCAACCTTTGCTGTGTCTGGAGAAAGATTCGTTGCTGTGGATGTCACATTCAGAAACACTGCTGGCCCTCAGAAGCACCAAGCAGTGGCTGTGAGGAACAATGCAGACCTCTCTACATTCTACCGTTGCAGTTTTGAGGGATATCAAGACACTCTCTATGTCCACTCTCTCAGGCAATTCTACAGGGAATGTGACATTTATGGCACTGTGGATTTCATTTTTGGAAATGCTGCTGTGGTATTCCAGAGCTGCAACATCTATGCCAGAAAACCATTGCCAAAGCAGAAGAATGCTGTCACAGCACAAGGCAGAACTGATCCCAACCAAAACACTGGAATTTCAATACAGAATTGCAGGATTGAGGCTGCACCTGACTTGGCTGCAGACTTGAAATCAACTGAAAATTACTTGGGCAGGCCATGGAAAGTATATTCAAGGACAGTATACATGCAGTCATATATTGGAGAACTAATTAAATCTGTTGGATGGTTAGAGTGGAATGGCACAGATGGATTAGACACCCTCTTTTATGGTGAGTTCAATAACTTTGGACCTGGTTCTGATACAAGCAAGAGGGTACAATGGAATGGTTACAATATATTGAGCCCTACACAAGCTTGGAACTTCACTGTGTATAACTTTACCTTGGGGAATACATGGCTTCCGGATACAGATATACCCTACTCTGAAGGACTTTAG 1863 0.4342 MSSPSMSISSFFFLSLFLPLLLAQTPSPSPTHAPSPSPSPTHTPSPSPTHSHATSPSASSSPTHTPTPSPSPSPKSAPPPPLPPTSTSSACKATLYPKLCRSILSSIRSSPSDPYKLGKFSIKQSLKQAKKLAKVFADFLKKHKSSSLSSAEIAALEDCSELNQLSVGYLESVSQELKSADSSNTELVEKIETYLSAVATNHYTCYDGLVVIKSSIVNALAVPLNNVTQLYSVSLGLVTQALKKNLKKHKTRKHGLPTKNYKVRQPLKKLIKLLHTKYSCATSSNCSTRSERILKETENKGILLKDFVIVNLNGTDNFTSIGEAIAAAPDNLRAEDGYFLIYAKEGSYEEYVIVPSQKKNILLIGDGINKTCITGNHSVVDGWTTFNSSTFAVSGERFVAVDVTFRNTAGPQKHQAVAVRNNADLSTFYRCSFEGYQDTLYVHSLRQFYRECDIYGTVDFIFGNAAVVFQSCNIYARKPLPKQKNAVTAQGRTDPNQNTGISIQNCRIEAAPDLAADLKSTENYLGRPWKVYSRTVYMQSYIGELIKSVGWLEWNGTDGLDTLFYGEFNNFGPGSDTSKRVQWNGYNILSPTQAWNFTVYNFTLGNTWLPDTDIPYSEGL* 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00097 620 CDD PMEI-like_3 90 239 - -
Lapu11g00097 620 Gene3D - 303 620 IPR012334 -
Lapu11g00097 620 MobiDBLite consensus disorder prediction 29 45 - -
Lapu11g00097 620 FunFam Pectinesterase 303 620 - -
Lapu11g00097 620 MobiDBLite consensus disorder prediction 24 89 - -
Lapu11g00097 620 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 89 240 IPR035513 -
Lapu11g00097 620 MobiDBLite consensus disorder prediction 46 62 - -
Lapu11g00097 620 NCBIfam pectinesterase inhibitor domain 88 240 IPR006501 GO:0004857
Lapu11g00097 620 SUPERFAMILY Pectin lyase-like 305 619 IPR011050 -
Lapu11g00097 620 ProSitePatterns Pectinesterase signature 2. 454 463 IPR033131 -
Lapu11g00097 620 PANTHER PECTINESTERASE 86 610 - -
Lapu11g00097 620 SMART PMEI_2 82 237 IPR006501 GO:0004857
Lapu11g00097 620 Gene3D Invertase/pectin methylesterase inhibitor family protein 85 241 IPR035513 -
Lapu11g00097 620 Pfam Pectinesterase 308 605 IPR000070 GO:0030599|GO:0042545
Lapu11g00097 620 Pfam Plant invertase/pectin methylesterase inhibitor 88 236 IPR006501 GO:0004857
Lapu11g00097 620 MobiDBLite consensus disorder prediction 63 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00097 Lapu-Chr11 3099686 3103545 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00097 90 620 Carbohydrate Esterase AT3G10720 62.873 0.0 711
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00097 K01051 - gmx:100808277 941.799