Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lapu11g00089 ATGGGGACCCAAACAATGGGATCTCAAGGTGGTGGTAAAGACAGTAATGGAAAACAGGCACAGGTCCAGCCTCTGGTGCGGCAAAACTCAATGTACAGTCTCACACTGGATGAGGTTCAGAATCAATTGGGTGATTTAGGGAAGCCACTAAGTAGTATGAACCTTGATGAGCTTCTGAAAAATGTGTGGACTGCAGAGGCAAACCAGACCATTGCGGTAGACAATGAGGGCACGGCACAAGCTGGTCAAGCTGCTTTGCAGCGTCAGGCTAGTCTGTCGCTAACTGGTGCACTGAGCAAGAAGACTGTGGACGAGGTTTGGAGAGATATCCAACAAAACAAAGTCAGTGAGGAGAAGAGGTTCCGAGACAGACAGCCTACTTTGGGAGAAATGACATTGGAGGATTTCTTGGTGAAAGCAGGAGTTGTTGCAGAATCATCTTCTAATAGAAAGAATACTGGTACTGTCGCTGCAGTTGAGCCAAACATGGCTGTACCACAGTTTCATTCACAGGGACAGTGGATGCAATATCCACAAGCACAGTATCAGCATCCACAACAAAGTTTAATGCAGATTTATATGCCTGGCCAGGGTATGGCACAACCAATGCACATGGGGGCTGGAGCTTCAATGGATGTTTCGTTTGCAGATGGCCAGGTTGCAATGCCATCACCTCTGATGGGAACCGTGTCAGATACACATACTCCTGGAAGAAAAAGGAGCACTCCTGAGGACATGATGGAGAAGACTGTTGAGAGGAGACAGAAAAGGATGATAAAAAATCGAGAATCTGCTGCTCGTTCAAGAGCAAGGAAACAGGCATACACAAATGAATTGGAGAATAAAGTCTCGCGTCTGGAAGAAGAAAATGAAATACTGAGGAAACGAAAGGAGGCAGAGAATATTTTGCCAAGTACACCACCTCCTGAACCGAAGTATCAACTTCGCCGAATAGGATCAGCTCCATTCTGA 972 0.464 MGTQTMGSQGGGKDSNGKQAQVQPLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTAEANQTIAVDNEGTAQAGQAALQRQASLSLTGALSKKTVDEVWRDIQQNKVSEEKRFRDRQPTLGEMTLEDFLVKAGVVAESSSNRKNTGTVAAVEPNMAVPQFHSQGQWMQYPQAQYQHPQQSLMQIYMPGQGMAQPMHMGAGASMDVSFADGQVAMPSPLMGTVSDTHTPGRKRSTPEDMMEKTVERRQKRMIKNRESAARSRARKQAYTNELENKVSRLEEENEILRKRKEAENILPSTPPPEPKYQLRRIGSAPF* 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lapu11g00089 323 SMART brlzneu 249 305 IPR004827 GO:0003700|GO:0006355
Lapu11g00089 323 Coils Coil 269 303 - -
Lapu11g00089 323 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 256 271 IPR004827 GO:0003700|GO:0006355
Lapu11g00089 323 CDD bZIP_plant_BZIP46 253 298 - -
Lapu11g00089 323 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 251 303 - -
Lapu11g00089 323 SUPERFAMILY Leucine zipper domain 253 297 IPR046347 GO:0003700|GO:0006355
Lapu11g00089 323 Gene3D - 251 303 - -
Lapu11g00089 323 MobiDBLite consensus disorder prediction 1 24 - -
Lapu11g00089 323 PRINTS cAMP response element binding (CREB) protein signature 286 303 - -
Lapu11g00089 323 PRINTS cAMP response element binding (CREB) protein signature 248 264 - -
Lapu11g00089 323 PRINTS cAMP response element binding (CREB) protein signature 266 286 - -
Lapu11g00089 323 PRINTS cAMP response element binding (CREB) protein signature 162 177 - -
Lapu11g00089 323 MobiDBLite consensus disorder prediction 225 284 - -
Lapu11g00089 323 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 26 322 IPR043452 GO:0003700|GO:0045893
Lapu11g00089 323 MobiDBLite consensus disorder prediction 237 284 - -
Lapu11g00089 323 Pfam bZIP transcription factor 253 297 IPR004827 GO:0003700|GO:0006355
Lapu11g00089 323 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 251 296 IPR004827 GO:0003700|GO:0006355
Lapu11g00089 323 MobiDBLite consensus disorder prediction 296 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lapu11g00089 Lapu-Chr11 2969863 2975025 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lapu11g00089 18 323 bZIP Transcription Factor Family AT3G56850 56.592 2.90e-98 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lapu11g00089 bZIP_1 8.6e-13 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lapu11g00089 K14432 - gmx:100101875 512.301